Evidence map›Paper›PMID 30452879›Full record

ArticleFASEB journal : official publication of the Federation of American Societies for Experimental Biology2019

Two-carbon folate cycle of commensal Lactobacillus reuteri 6475 gives rise to immunomodulatory ethionine, a source for histone ethylation.

Daniel Röth, Abby J Chiang, Weidong Hu, Gabriel B Gugiu, Christina N Morra, James Versalovic, Markus Kalkum

Abstract read
In one paragraph

Article in FASEB journal : official publication of the Federation of American Societies for Experimental Biology, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 21 papers.

0numbers the graph read from it
0cells of the map it votes in
21citing papers in PubMed
3.0field-weighted citation impact, top 9% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

21 citing papers in PubMed, 33 citations in OpenAlex.

  1. Article
  2. Review
  3. Review
  4. Review
  5. Article
  6. Review
  7. Microbiome and Metabolomics in Liver Cancer: Scientific Technology.International journal of molecular sciences · 2022
    Review
  8. Review
  9. Next-Generation Probiotic Therapy to Protect the Intestines From Injury.Frontiers in cellular and infection microbiology · 2022
    Review
  10. Article
  11. The probiotic and immunomodulation effects ofFrontiers in cellular and infection microbiology · 2022
    Article
  12. Nutrients · 2021
    Review
  13. Review
  14. Review
  15. Review
  16. Review
  17. Epigenome-metabolome-microbiome axis in health and IBD.Current opinion in microbiology · 2020
    Review
  18. Review
  19. Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 5 institutions in 1 country.

Daniel RöthDepartment of Molecular Imaging and Therapy, Beckman Research Institute of the City of Hope, Duarte, California, USA.
Abby J ChiangDepartment of Molecular Imaging and Therapy, Beckman Research Institute of the City of Hope, Duarte, California, USA.
Weidong HuDepartment of Molecular Imaging and Therapy, Beckman Research Institute of the City of Hope, Duarte, California, USA.
Gabriel B GugiuDepartment of Molecular Imaging and Therapy, Beckman Research Institute of the City of Hope, Duarte, California, USA.
Christina N MorraIntegrative Molecular and Biomedical Sciences (IMBS), Baylor College of Medicine, Houston, Texas, USA.
James VersalovicDepartment of Pathology and Immunology, Baylor College of Medicine, Houston, Texas, USA; and.
Markus KalkumDepartment of Molecular Imaging and Therapy, Beckman Research Institute of the City of Hope, Duarte, California, USA.
City of Hope · USCity Of Hope National Medical Center · USBaylor College of Medicine · USBeckman Research InstituteTexas Children's Hospital · US

Funding

Transgenic Mouse FacilityP30CA033572 · NCI · CITY OF HOPE/BECKMAN RESEARCH INSTITUTE · PI STANLEY R. HAMILTON · 1985 to 2026
$86.3M
Tissue Analysis & Molecular Imaging CoreP30DK056338 · NIDDK · BAYLOR COLLEGE OF MEDICINE · PI Geoffrey A Preidis · 2001 to 2026
$28.3M
Gut L-Histidine Metabolism and Histamine Signaling in Colonic NeoplasiaU01CA170930 · NCI · BAYLOR COLLEGE OF MEDICINE · PI VERSALOVIC, JAMES · 2013 to 2017
$2.8M
NCI NIH HHS P30 CA033572NCI NIH HHS U01 CA170930NIDDK NIH HHS P30 DK056338
6 · The paper itself

Abstract

Colonization of the gut by certain probiotic Lactobacillus reuteri strains has been associated with reduced risk of inflammatory diseases and colorectal cancer. Previous studies pointed to a functional link between immunomodulation, histamine production, and folate metabolism, the central 1-carbon pathway for the transfer of methyl groups. Using mass spectrometry and NMR spectroscopy, we analyzed folate metabolites of L. reuteri strain 6475 and discovered that the bacterium produces a 2-carbon-transporting folate in the form of 5,10-ethenyl-tetrahydrofolyl polyglutamate. Isotopic labeling permitted us to trace the source of the 2-carbon unit back to acetate of the culture medium. We show that the 2C folate cycle of L. reuteri is capable of transferring 2 carbon atoms to homocysteine to generate the unconventional amino acid ethionine, a known immunomodulator. When we treated monocytic THP-1 cells with ethionine, their transcription of TNF-α was inhibited and cell proliferation reduced. Mass spectrometry of THP-1 histones revealed incorporation of ethionine instead of methionine into proteins, a reduction of histone-methylation, and ethylation of histone lysine residues. Our findings suggest that the microbiome can expose the host to ethionine through a novel 2-carbon transporting variant of the folate cycle and modify human chromatin via ethylation.-Röth, D., Chiang, A. J., Hu, W., Gugiu, G. B., Morra, C. N., Versalovic, J., Kalkum, M. The two-carbon folate cycle of commensal Lactobacillus reuteri 6475 gives rise to immunomodulatory ethionine, a source for histone ethylation.

Indexed as

Amino AcidsCarbonCell ProliferationCells, CulturedCulture MediaEthionineFolic AcidHistonesHomocysteineHumansImmunomodulationLimosilactobacillus reuteriMethionineMethylationMicrobiotaProbioticsAmino AcidsCarbonCulture MediaEthionineFolic AcidHistonesHomocysteineMethionineTumor Necrosis Factor-alphaethenyltetrahydrofolatelysine ethylationmicrobiomeposttranslational modificationprobiotic bacteria

Identifiers

PMID30452879
PMCPMC6404577
OpenAlexW2900587545

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.