Evidence map›Paper›PMID 30452757›Full record

ArticleCarcinogenesis2019

Identification of master regulator genes of UV response and their implications for skin carcinogenesis.

Yao Shen, Gabriel Chan, Michael Xie, Wangyong Zeng, Liang Liu

Open access · greenAbstract read
In one paragraph

Article in Carcinogenesis, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 10 papers.

0numbers the graph read from it
0cells of the map it votes in
10citing papers in PubMed
0.3field-weighted citation impact, top 42% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

10 citing papers in PubMed, 12 citations in OpenAlex.

  1. Article
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  8. Article
  9. UV biomarker genes for classification and risk stratification of cutaneous actinic keratoses and squamous cell carcinoma subtypes.FASEB journal : official publication of the Federation of American Societies for Experimental Biology · 2020
    Article
  10. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 1 institution in 1 country.

Yao ShenDepartment of Dermatology, Columbia University, Russ Berrie Medical Science Pavilion, New York, USA.
Gabriel ChanDepartment of Dermatology, Columbia University, Russ Berrie Medical Science Pavilion, New York, USA.
Michael XieDepartment of Dermatology, Columbia University, Russ Berrie Medical Science Pavilion, New York, USA.
Wangyong ZengDepartment of Dermatology, Columbia University, Russ Berrie Medical Science Pavilion, New York, USA.
Liang LiuDepartment of Dermatology, Columbia University, Russ Berrie Medical Science Pavilion, New York, USA.
Columbia University · US

Funding

Tumor Biology and Microenvironment ProgramP30CA013696 · NCI · COLUMBIA UNIV NEW YORK MORNINGSIDE · PI Anil K Rustgi · 1985 to 2026
$115.3M
True Metal fac coreP30ES009089 · NIEHS · COLUMBIA UNIVERSITY HEALTH SCIENCES · PI MATTHEW S PERZANOWSKI · 1998 to 2026
$44.7M
Understanding the Biology of Chronic Ulcers: Histological and Molecular Basis...P30AR044535 · NIAMS · COLUMBIA UNIVERSITY HEALTH SCIENCES · PI BICKERS, DAVID RINSEY · 1997 to 2015
$6.9M
Epigenetic control of target gene activity by hairless in skin homeostasisK01AR064315 · NIAMS · UNIVERSITY OF MINNESOTA · PI LIU, LIANG · 2014 to 2018
$582k
NCI NIH HHS P30 CA013696NIAMS NIH HHS K01 AR064315NIAMS NIH HHS P30 AR044535NIEHS NIH HHS P30 ES009089
6 · The paper itself

Abstract

Solar UV radiation is a major environmental risk factor for skin cancer. Despite decades of robust and meritorious investigation, our understanding of the mechanisms underlying UV-induced skin carcinogenesis remain incomplete. We previously performed comprehensive transcriptomic profiling in human keratinocytes following exposure to different UV radiation conditions to generate UV-specific gene expression signatures. In this study, we utilized Virtual Inference of Protein Activity by Enriched Regulon (VIPER), a robust systems biology tool, on UV-specific skin cell gene signatures to identify master regulators (MRs) of UV-induced transcriptomic changes. We identified multiple prominent candidate UV MRs, including forkhead box M1 (FOXM1), thyroid hormone receptor interactor 13 and DNA isomerase II alpha, which play important roles in cell cycle regulation and genome stability. MR protein activity was either activated or suppressed by UV in normal keratinocytes. Intriguingly, many of the UV-suppressed MRs were activated in human skin squamous cell carcinomas (SCCs), highlighting their importance in skin cancer development. We further demonstrated that selective inhibition of FOXM1, whose activity was elevated in SCC cells, was detrimental to SCC cell survival. Taken together, our study uncovered novel UV MRs that can be explored as new therapeutic targets for future skin cancer treatment.

Indexed as

Biomarkers, TumorCarcinogenesisCarcinoma, Squamous CellForkhead Box Protein M1Gene Expression Regulation, NeoplasticHumansNeoplasms, Radiation-InducedPrognosisSkin NeoplasmsSurvival RateTranscriptomeUltraviolet RaysBiomarkers, TumorForkhead Box Protein M1FOXM1 protein, human

Identifiers

PMID30452757
PMCPMC6610169
OpenAlexW2901814486

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.