Evidence map›Paper›PMID 30452435›Full record

ArticlePloS one2018

Spread of GES-5 carbapenemase-producing Pseudomonas aeruginosa clinical isolates in Japan due to clonal expansion of ST235.

Tomomi Hishinuma, Tatsuya Tada, Kyoko Kuwahara-Arai, Norio Yamamoto, Masahiro Shimojima, Teruo Kirikae

Abstract read
In one paragraph

Article in PloS one, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 26 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
26citing papers in PubMed, 1 pooled it
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

26 citing papers in PubMed, 1 synthesis or guideline pooled it.

  1. Pooled it
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  6. Article
  7. Novel resistance ICEs carrying theAntimicrobial agents and chemotherapy · 2024
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  9. AcquiredPathogens (Basel, Switzerland) · 2023
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  10. Article
  11. Article
  12. Review
  13. The Intriguing Carbapenemases ofThe Yale journal of biology and medicine · 2022
    Review
  14. Article
  15. Article
  16. Article
  17. Genomic characterization of carbapenem-non-susceptibleEmerging microbes & infections · 2021
    Article
  18. Article
  19. Review
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors.

Tomomi HishinumaDepartment of Microbiology, Juntendo University School of Medicine, Tokyo, Japan.
Tatsuya TadaDepartment of Microbiology, Juntendo University School of Medicine, Tokyo, Japan.ORCID 0000-0002-3053-1879
Kyoko Kuwahara-AraiDepartment of Microbiology, Juntendo University School of Medicine, Tokyo, Japan.
Norio YamamotoDepartment of Microbiology, Juntendo University School of Medicine, Tokyo, Japan.
Masahiro ShimojimaBML Inc., Kawagoe, Saitama, Japan.
Teruo KirikaeDepartment of Microbiology, Juntendo University School of Medicine, Tokyo, Japan.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The first outbreak in Japan of GES-5 carbapenemase-producing Pseudomonas aeruginosa occurred in a long-term care facility in 2014. To assess the spread of GES-5 producing P. aeruginosa clinical isolates in medical settings in Japan, 1,476 carbapenem-resistant P. aeruginosa isolates obtained from 2012 to 2016 were characterized. Of these 1,476 isolates, 104 (7.0%) harbored blaGES-5. Southern blotting revealed that the blaGES-5 was located on the chromosome. The isolation rates of these GES-5 producers increased significantly every year, from 2.0% (6 of 295) in 2012 to 2.8% (8 of 283) in 2013 to 5.3% (16 of 303) in 2014 to 9.7% (29 of 300) in 2015 to 15.3% (45 of 295) in 2016. Of the 104 GES-5 producers, 102 belonged to clonal complex (CC) 235, including 99 belonging to ST235 and three belonging to ST2233). Whole genome sequence analysis revealed that CC235 P. aeruginosa harboring blaGES-5 spread in a clonal manner. These results indicate that these GES-5 producing CC235 P. aeruginosa clinical isolates have spread in medical settings throughout Japan.

Indexed as

Bacterial Proteinsbeta-LactamasesDNA, BacterialDrug Resistance, Multiple, BacterialEvolution, MolecularGeography, MedicalHumansJapanMolecular EpidemiologyPhylogenyPseudomonas aeruginosaPseudomonas InfectionsBacterial Proteinsbeta-LactamasescarbapenemaseDNA, Bacterial

Identifiers

PMID30452435
PMCPMC6242314

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.