Evidence map›Paper›PMID 30452242›Full record

ArticleBiochemistry2018

RNA Recognition-like Motifs Activate a Mitogen-Activated Protein Kinase.

Timothy Phillips, Chong Wai Tio, Gregory Omerza, Abhimannyu Rimal, Ravi K Lokareddy, Gino Cingolani, Edward Winter

Abstract read
In one paragraph

Article in Biochemistry, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 3 papers.

0numbers the graph read from it
0cells of the map it votes in
3citing papers in PubMed
0.1field-weighted citation impact, top 51% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

3 citing papers in PubMed, 4 citations in OpenAlex.

  1. Article
  2. Meiotic Cytokinesis inJournal of fungi (Basel, Switzerland) · 2024
    Review
  3. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 1 institution in 1 country.

Timothy PhillipsDepartment of Biochemistry and Molecular Biology , Thomas Jefferson University , Philadelphia , Pennsylvania 19107 , United States.
Chong Wai TioDepartment of Biochemistry and Molecular Biology , Thomas Jefferson University , Philadelphia , Pennsylvania 19107 , United States.
Gregory OmerzaDepartment of Biochemistry and Molecular Biology , Thomas Jefferson University , Philadelphia , Pennsylvania 19107 , United States.
Abhimannyu RimalDepartment of Biochemistry and Molecular Biology , Thomas Jefferson University , Philadelphia , Pennsylvania 19107 , United States.
Ravi K LokareddyDepartment of Biochemistry and Molecular Biology , Thomas Jefferson University , Philadelphia , Pennsylvania 19107 , United States.
Gino CingolaniDepartment of Biochemistry and Molecular Biology , Thomas Jefferson University , Philadelphia , Pennsylvania 19107 , United States.ORCID 0000-0002-9206-9640
Edward WinterDepartment of Biochemistry and Molecular Biology , Thomas Jefferson University , Philadelphia , Pennsylvania 19107 , United States.ORCID 0000-0003-2403-1031
Thomas Jefferson University · US

Funding

Non-canonical MAPK signaling in yeastR01GM120090 · NIGMS · THOMAS JEFFERSON UNIVERSITY · PI WINTER, EDWARD P · 2016 to 2023
$2.6M
Multisubunit viral ATPases that couple ATP-hydrolysis to genome translocationR01GM100888 · NIGMS · THOMAS JEFFERSON UNIVERSITY · PI CINGOLANI, GINO · 2012 to 2020
$2.5M
Regulation of Nuclear Import Through Importin Alpha IsoformsR01GM122844 · NIGMS · THOMAS JEFFERSON UNIVERSITY · PI CINGOLANI, GINO · 2018 to 2021
$1.4M
NIGMS NIH HHS R01 GM100888NIGMS NIH HHS R01 GM120090NIGMS NIH HHS R01 GM122844
6 · The paper itself

Abstract

Smk1 is a mitogen-activated protein kinase (MAPK) family member in the yeast Saccharomyces cerevisiae that controls the postmeiotic program of spore formation. Ssp2 is a meiosis-specific protein that activates Smk1 and triggers the autophosphorylation of its activation loop. A fragment of Ssp2 that is sufficient to activate Smk1 contains two segments that resemble RNA recognition motifs (RRMs). Mutations in either of these motifs eliminated Ssp2's ability to activate Smk1. In contrast, deletions and insertions within the segment linking the RRM-like motifs only partially reduced the activity of Ssp2. Moreover, when the two RRM-like motifs were expressed as separate proteins in bacteria, they activated Smk1. We also find that both motifs can be cross-linked to Smk1 and that at least one of the motifs binds near the ATP-binding pocket of the MAPK. These findings demonstrate that motifs related to RRMs can directly activate protein kinases.

Indexed as

Binding SitesEnzyme ActivationMeiosisMitogen-Activated Protein KinasesModels, MolecularMutationProtein ConformationRecombinant Fusion ProteinsRNA, FungalRNA Recognition MotifSaccharomyces cerevisiaeSaccharomyces cerevisiae ProteinsSpores, FungalMitogen-Activated Protein KinasesRecombinant Fusion ProteinsRNA, FungalSaccharomyces cerevisiae ProteinsSmk1 protein, S cerevisiaeSSP2 protein, S cerevisiae

Identifiers

PMID30452242
PMCPMC6457901
OpenAlexW2901616183

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.