Evidence map›Paper›PMID 30451831›Full record

ArticleNature communications2018

TBX2 is a neuroblastoma core regulatory circuitry component enhancing MYCN/FOXM1 reactivation of DREAM targets.

Bieke Decaesteker, Geertrui Denecker, Christophe Van Neste, Emmy M Dolman, Wouter Van Loocke, Moritz Gartlgruber, Carolina Nunes, Fanny De Vloed, Pauline Depuydt, Karen Verboom and 23 more

Open access · goldAbstract read
In one paragraph

Article in Nature communications, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 73 papers.

0numbers the graph read from it
0cells of the map it votes in
73citing papers in PubMed
7.8field-weighted citation impact, top 2% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

73 citing papers in PubMed, 109 citations in OpenAlex.

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  12. Cell state plasticity in neuroblastoma.EJC paediatric oncology · 2024
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13 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

33 authors at 8 institutions in 4 countries.

Bieke DecaestekerCenter for Medical Genetics, Ghent University, Ghent, 9000, Belgium. bieke.decaesteker@ugent.be.ORCID http://orcid.org/0000-0003-2264-781X
Geertrui DeneckerCenter for Medical Genetics, Ghent University, Ghent, 9000, Belgium.ORCID http://orcid.org/0000-0002-2515-2911
Christophe Van NesteCenter for Medical Genetics, Ghent University, Ghent, 9000, Belgium.ORCID http://orcid.org/0000-0002-5958-5731
Emmy M DolmanPrincess Máxima Center for Pediatric Oncology, Department of Translational Research, Utrecht, 3584, The Netherlands.
Wouter Van LoockeCenter for Medical Genetics, Ghent University, Ghent, 9000, Belgium.
Moritz GartlgruberNeuroblastoma Genomics, German Cancer Research Center (DKFZ), Heidelberg, 69120, Germany.
Carolina NunesCenter for Medical Genetics, Ghent University, Ghent, 9000, Belgium.ORCID http://orcid.org/0000-0002-8564-6171
Fanny De VloedCenter for Medical Genetics, Ghent University, Ghent, 9000, Belgium.ORCID http://orcid.org/0000-0002-1130-7900
Pauline DepuydtCenter for Medical Genetics, Ghent University, Ghent, 9000, Belgium.ORCID http://orcid.org/0000-0003-2956-6457
Karen VerboomCenter for Medical Genetics, Ghent University, Ghent, 9000, Belgium.ORCID http://orcid.org/0000-0002-8534-2995
Dries RombautCenter for Medical Genetics, Ghent University, Ghent, 9000, Belgium.ORCID http://orcid.org/0000-0001-7526-7541
Siebe LoontiensCenter for Medical Genetics, Ghent University, Ghent, 9000, Belgium.ORCID http://orcid.org/0000-0002-4602-4580
Jolien De WynCenter for Medical Genetics, Ghent University, Ghent, 9000, Belgium.ORCID http://orcid.org/0000-0002-0495-1570
Waleed M KholosyPrincess Máxima Center for Pediatric Oncology, Department of Translational Research, Utrecht, 3584, The Netherlands.
Bianca KoopmansPrincess Máxima Center for Pediatric Oncology, Department of Translational Research, Utrecht, 3584, The Netherlands.
Anke H W EssingPrincess Máxima Center for Pediatric Oncology, Department of Translational Research, Utrecht, 3584, The Netherlands.ORCID http://orcid.org/0000-0002-3314-2828
Carl HerrmannInstitute of Pharmacy and Molecular Biotechnology, and Bioquant Center, University of Heidelberg, Im Neuenheimer Feld 267, Heidelberg, 69120, Germany.
Daniel DreidaxNeuroblastoma Genomics, German Cancer Research Center (DKFZ), Heidelberg, 69120, Germany.ORCID http://orcid.org/0000-0002-5330-2972
Kaat DurinckCenter for Medical Genetics, Ghent University, Ghent, 9000, Belgium.
Dieter DeforceCancer Research Institute Ghent (CRIG), Ghent, 9000, Belgium.ORCID http://orcid.org/0000-0002-0635-661X
Filip Van NieuwerburghCancer Research Institute Ghent (CRIG), Ghent, 9000, Belgium.ORCID http://orcid.org/0000-0001-8815-5485
Anton HenssenDepartment of Pediatric Oncology and Hematology, Charité-Universitätsmedizin Berlin, Berlin, 13353, Germany.ORCID http://orcid.org/0000-0003-1534-778X
Rogier VersteegDepartment of Oncogenomics, Academic Medical Center, Amsterdam, 1105, AZ, Netherlands.ORCID http://orcid.org/0000-0001-7172-0388
Valentina BoevaInstitut Cochin, INSERM U1016, CNRS UMR 8104, Paris Descartes University UMR-S1016, Paris, 75014, France.ORCID http://orcid.org/0000-0002-4382-7185
Gudrun SchleiermacherInstitut Curie, PSL Research University, Equipe Labellisée Ligue contre le Cancer, Laboratory Recherche Translationnelle en Oncologie Pédiatrique (RTOP), Laboratoire "Gilles Thomas", Institut Curie, Department of Translational Research, Institut Curie, SIREDO: Care, Innovation and Research for Children, Adolescents and Young Adults with Cancer, Institut Curie, Paris, 75248, France.ORCID http://orcid.org/0000-0002-0133-5879
Johan van NesDepartment of Oncogenomics, Academic Medical Center, Amsterdam, 1105, AZ, Netherlands.ORCID http://orcid.org/0000-0001-7691-1431
Pieter MestdaghCenter for Medical Genetics, Ghent University, Ghent, 9000, Belgium.
Suzanne VanhauwaertCenter for Medical Genetics, Ghent University, Ghent, 9000, Belgium.ORCID http://orcid.org/0000-0002-7768-4549
Johannes H SchulteDepartment of Pediatric Oncology and Hematology, Charité-Universitätsmedizin Berlin, Berlin, 13353, Germany.
Frank WestermannNeuroblastoma Genomics, German Cancer Research Center (DKFZ), Heidelberg, 69120, Germany.
Jan J MolenaarPrincess Máxima Center for Pediatric Oncology, Department of Translational Research, Utrecht, 3584, The Netherlands.
Katleen De PreterCenter for Medical Genetics, Ghent University, Ghent, 9000, Belgium.
Frank SpelemanCenter for Medical Genetics, Ghent University, Ghent, 9000, Belgium. Franki.speleman@ugent.be.ORCID http://orcid.org/0000-0002-6628-8559
Ghent University Hospital · BEGerman Cancer Research Center · DEPrincess Máxima Center · NLAmsterdam UMC Location University of Amsterdam · NLGhent University · BECentre National de la Recherche Scientifique · FRCharité - Universitätsmedizin Berlin · DEUniversité Paris Sciences et Lettres · FR

Funding

Agentschap voor Innovatie door Wetenschap en Technologie (Agency for Innovation by Science and Technology, Flanders) 131579
6 · The paper itself

Abstract

Chromosome 17q gains are almost invariably present in high-risk neuroblastoma cases. Here, we perform an integrative epigenomics search for dosage-sensitive transcription factors on 17q marked by H3K27ac defined super-enhancers and identify TBX2 as top candidate gene. We show that TBX2 is a constituent of the recently established core regulatory circuitry in neuroblastoma with features of a cell identity transcription factor, driving proliferation through activation of p21-DREAM repressed FOXM1 target genes. Combined MYCN/TBX2 knockdown enforces cell growth arrest suggesting that TBX2 enhances MYCN sustained activation of FOXM1 targets. Targeting transcriptional addiction by combined CDK7 and BET bromodomain inhibition shows synergistic effects on cell viability with strong repressive effects on CRC gene expression and p53 pathway response as well as several genes implicated in transcriptional regulation. In conclusion, we provide insight into the role of the TBX2 CRC gene in transcriptional dependency of neuroblastoma cells warranting clinical trials using BET and CDK7 inhibitors.

Indexed as

Gene Expression Regulation, NeoplasticAntineoplastic AgentsAzepinesBrain NeoplasmsCell Line, TumorCell SurvivalCyclin-Dependent Kinase-Activating KinaseCyclin-Dependent KinasesDNA Copy Number VariationsEpigenesis, GeneticForkhead Box Protein M1HEK293 CellsHistonesHumansKv Channel-Interacting ProteinsNeuroblastomaAntineoplastic AgentsAzepinesCDK7 protein, humanCyclin-Dependent Kinase-Activating KinaseCyclin-Dependent KinasesForkhead Box Protein M1FOXM1 protein, humanHistones(+)-JQ1 compoundKCNIP3 protein, humanKv Channel-Interacting ProteinsMYCN protein, humanN-Myc Proto-Oncogene ProteinPanobinostatPhenylenediaminesPyrimidinesRepressor ProteinsT-Box Domain Protein 2T-Box Domain ProteinsTHZ1 compoundTriazolesTumor Suppressor Protein p53

Identifiers

PMID30451831
PMCPMC6242972
OpenAlexW2901753666

What OpenQuestion holds

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LicenceCC BY
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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.