Evidence map›Paper›PMID 30451416›Full record

ArticleJournal of nematology2018

NMR Analysis Reveals a Wealth of Metabolites in Root-Knot Nematode Resistant Roots of

Mihail Kantor, Amnon Levi, Judith Thies, Nihat Guner, Camelia Kantor, Stuart Parnham, Arezue Boroujerdi

Abstract read
In one paragraph

Article in Journal of nematology, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 4 papers.

0numbers the graph read from it
0cells of the map it votes in
4citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

4 citing papers in PubMed.

  1. Article
  2. Review
  3. Article
  4. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors.

Mihail KantorClaflin University, 898 Goff Ave., Orangeburg, SC 29115 ; USDA, ARS, U.S. Vegetable Laboratory, 2700 Savannah Highway, Charleston, SC 29414.
Amnon LeviUSDA, ARS, U.S. Vegetable Laboratory, 2700 Savannah Highway, Charleston, SC 29414.
Judith ThiesUSDA, ARS, U.S. Vegetable Laboratory, 2700 Savannah Highway, Charleston, SC 29414.
Nihat GunerSakata Seed America, 18095 Serene Drive Morgan Hill, CA 95037.
Camelia KantorUSGIF, 2325 Dulles Corner Blvd, Suite 450, Herndon, VA 20171.
Stuart ParnhamMarine Biochemical Sciences Hollings Marine Laboratory National Institute of Standards and Technology, 331 Fort Johnson Road, Charleston, SC 29412.
Arezue BoroujerdiClaflin University, 898 Goff Ave., Orangeburg, SC 29115.

Funding

South Carolina IDeA Networks of Biomedical Research (SC INBRE V)P20GM103499 · NIGMS · UNIVERSITY OF SOUTH CAROLINA AT COLUMBIA · PI EDIE C GOLDSMITH · 2012 to 2026
$61.0M
NIGMS NIH HHS P20 GM103499
6 · The paper itself

Abstract

Citrullus amarus ( CA ) (previously known as Citrullus lanatus var. citroides ) accessions collected in southern Africa are known to have resistance to root-knot nematodes (RKN) and are suitable rootstocks for grafted watermelon. The objective of this study was to conduct a comparative metabolomics analysis and identify unique metabolites in roots of CA accessions versus roots of watermelon cultivars ( Citrullus lanatus (Thunb.) Matsum. and Nakai var. lanatus; CL ). Nuclear magnetic resonance (NMR) technology and principal component analysis (PCA) were used to analyze and compare metabolic profiles of seven CA accessions resistant to RKN along with two RKN-susceptible watermelon cultivars (Charleston Gray and Crimson Sweet). Calculation of the Mahalanobis distance revealed that the CA United States Plant Introduction (PI) 189225 (Line number 1832) and PI 482324 (1849) have the most distinct metabolic profiles compared with the watermelon cultivars Charleston Gray and Crimson Sweet, respectively. Several amino acids identified in the CA accessions were reported in previous studies to have a nematicidal effect. The results in this study indicate that roots of watermelon accessions collected in the wild are rich in metabolic compounds. These metabolic compounds may have been diminished in watermelon cultivars as a consequence of many years of cultivation and selection for desirable fruit qualities.

Indexed as

Biochemical pathway analysisCitrullus amarusCitrullus lanatusNuclear magnetic resonanceRoot-knot nematodesWatermelon roots

Identifiers

PMID30451416
PMCPMC6909326

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.