Evidence map›Paper›PMID 30451293›Full record

ArticleThe British journal of dermatology2019

POT1 germline mutations but not TERT promoter mutations are implicated in melanoma susceptibility in a large cohort of Spanish melanoma families.

M Potrony, J A Puig-Butille, M Ribera-Sola, V Iyer, C D Robles-Espinoza, P Aguilera, C Carrera, J Malvehy, C Badenas, M T Landi and 2 more

Open access · greenAbstract readVideo-Audio Media
In one paragraph

Article in The British journal of dermatology, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 28 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
28citing papers in PubMed, 1 pooled it
1.4field-weighted citation impact, top 15% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

28 citing papers in PubMed, 1 synthesis or guideline pooled it, 47 citations in OpenAlex.

  1. Guideline
  2. Article
  3. Review
  4. Review
  5. Association between thyroid disorders and extra-thyroidal cancers, a review.Clinical & translational oncology : official publication of the Federation of Spanish Oncology Societies and of the National Cancer Institute of Mexico · 2024
    Review
  6. Article
  7. AGenes · 2024
    Review
  8. Review
  9. Article
  10. HGG advances · 2023
    Article
  11. Population-based analysis ofJournal of medical genetics · 2023
    Article
  12. Article
  13. Review
  14. Review
  15. Is Melanoma Progression Affected by Thyroid Diseases?International journal of molecular sciences · 2022
    Review
  16. Review
  17. Review
  18. Frontiers in veterinary science · 2022
    Article
  19. Review
  20. Journal of medical genetics · 2020
    Article
4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

12 authors at 4 institutions in 4 countries.

M PotronyDermatology Department, Hospital Clínic de Barcelona, IDIBAPS, Universitat de Barcelona, Barcelona, Spain.ORCID 0000-0003-2766-0765
J A Puig-ButilleCentro de Investigación Biomédica en Red de Enfermedades Raras (CIBERER), Barcelona, Spain.
M Ribera-SolaDermatology Department, Hospital Clínic de Barcelona, IDIBAPS, Universitat de Barcelona, Barcelona, Spain.
V IyerBiochemistry and Molecular Genetics Department, Melanoma Unit, Hospital Clínic de Barcelona, IDIBAPS, Universitat de Barcelona, Barcelona, Spain.
C D Robles-EspinozaLaboratorio Internacional de Investigación sobre el Genoma Humano, Universidad Nacional Autónoma de México, Campus Juriquilla, Santiago de Querétaro, Mexico.
P AguileraDermatology Department, Hospital Clínic de Barcelona, IDIBAPS, Universitat de Barcelona, Barcelona, Spain.
C CarreraDermatology Department, Hospital Clínic de Barcelona, IDIBAPS, Universitat de Barcelona, Barcelona, Spain.ORCID 0000-0003-1608-8820
J MalvehyDermatology Department, Hospital Clínic de Barcelona, IDIBAPS, Universitat de Barcelona, Barcelona, Spain.
C BadenasCentro de Investigación Biomédica en Red de Enfermedades Raras (CIBERER), Barcelona, Spain.
M T LandiDivision of Cancer Epidemiology and Genetics, National Cancer Institute, Bethesda, MD, U.S.A.
D J AdamsExperimental Cancer Genetics Group, Wellcome Trust Sanger Institute, Hinxton, Cambridge, U.K.
S PuigDermatology Department, Hospital Clínic de Barcelona, IDIBAPS, Universitat de Barcelona, Barcelona, Spain.ORCID 0000-0003-1337-9745
Centre for Biomedical Network Research on Rare Diseases · ESHospital Clínic de Barcelona · ESWellcome Sanger Institute · GBNational Cancer Institute · US

Funding

Genetic Epidermiology of MelanomaR01CA083115 · NCI · UNIVERSITY OF PENNSYLVANIA · PI BISHOP, DAVID TIMOTHY, ELDER, DAVID ERIC · 2001 to 2017
$13.0M
NCI NIH HHS R01 CA083115Wellcome Trust
6 · The paper itself

Abstract

backgroundGermline mutations in telomere-related genes such as POT1 and TERT predispose individuals to familial melanoma.

objectivesTo evaluate the prevalence of germline mutations in POT1 and TERT in a large cohort of Spanish melanoma-prone families (at least two affected first- or second-degree relatives).

methodsOverall, 228 CDKN2A wild-type melanoma-prone families were included in the study. Screening of POT1 was performed in one affected person from each family and TERT was sequenced in one affected patient from 202 families (26 families were excluded owing to DNA exhaustion/degradation). TERT promoter sequencing was extended to an additional 30 families with CDKN2A mutation and 70 patients with sporadic multiple primary melanoma (MPM) with a family history of other cancers.

resultsWe identified four families with potentially pathogenic POT1 germline mutations: a missense variant c.233T>C (p.Ile78Thr); a nonsense variant c.1030G>T (p.Glu344*); and two other variants, c.255G>A (r.125_255del) and c.1792G>A (r.1791_1792insAGTA, p.Asp598Serfs*22), which we confirmed disrupted POT1 mRNA splicing. A TERT promoter variant of unknown significance (c.-125C>A) was detected in a patient with MPM, but no germline mutations were detected in TERT promoter in cases of familial melanoma.

conclusionsOverall, 1·7% of our CDKN2A/CDK4-wild type Spanish melanoma-prone families carry probably damaging mutations in POT1. The frequency of TERT promoter germline mutations in families with melanoma in our population is extremely rare.

Indexed as

Genetic Predisposition to DiseaseAdultAgedCodon, NonsenseCohort StudiesCutaneous Malignant MelanomaCyclin-Dependent Kinase Inhibitor p16DNA Mutational AnalysisFemaleGenetic TestingGerm-Line MutationHumansMaleMedical History TakingMelanomaMiddle AgedCDKN2A protein, humanCodon, NonsenseCyclin-Dependent Kinase Inhibitor p16POT1 protein, humanShelterin ComplexTelomeraseTelomere-Binding ProteinsTERT protein, human

Identifiers

PMID30451293
PMCPMC6526091
OpenAlexW2901762087

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.