Evidence map›Paper›PMID 30447054›Full record

ArticleMolecular genetics & genomic medicine2019

Mutations in STAG2 cause an X-linked cohesinopathy associated with undergrowth, developmental delay, and dysmorphia: Expanding the phenotype in males.

Sureni V Mullegama, Steven D Klein, Rebecca H Signer, UCLA Clinical Genomics Center, Eric Vilain, Julian A Martinez-Agosto

Open access · goldAbstract readCase Reports
In one paragraph

Article in Molecular genetics & genomic medicine, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 24 papers.

0numbers the graph read from it
0cells of the map it votes in
24citing papers in PubMed
1.8field-weighted citation impact, top 15% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

24 citing papers in PubMed, 41 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
  4. Article
  5. Article
  6. Review
  7. Review
  8. Diagnostics (Basel, Switzerland) · 2025
    Article
  9. Article
  10. STAG2: Computational Analysis of Missense Variants Involved in Disease.International journal of molecular sciences · 2024
    Article
  11. Article
  12. Review
  13. Article
  14. Somatic mosaicism inFrontiers in cell and developmental biology · 2022
    Article
  15. Article
  16. Cohesin Mutations in Cancer: Emerging Therapeutic Targets.International journal of molecular sciences · 2021
    Review
  17. Article
  18. Article
  19. Nonsense variants ofHuman genome variation · 2020
    Article
  20. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 3 institutions in 1 country.

Sureni V MullegamaDepartment of Molecular and Human Genetics, Baylor College of Medicine, Houston, Texas.
Steven D KleinDepartment of Human Genetics, David Geffen School of Medicine, University of California, Los Angeles, Los Angeles, California.ORCID 0000-0001-8634-0388
Rebecca H SignerDivision of Medical Genetics, Department of Pediatrics, David Geffen School of Medicine, University of California, Los Angeles, Los Angeles, California.
UCLA Clinical Genomics CenterDepartment of Pathology and Laboratory Medicine, David Geffen School of Medicine, University of California, Los Angeles, Los Angeles, California.
Eric VilainDepartment of Genomic and Precision Medicine, Children's National Hospital, Washington, District of Columbia.
Julian A Martinez-AgostoDepartment of Human Genetics, David Geffen School of Medicine, University of California, Los Angeles, Los Angeles, California.ORCID 0000-0001-6776-6949
University of California, Los Angeles · USBaylor College of Medicine · USChildren's National · US

Funding

UCLA Clinical and Translational Science InstituteUL1TR000124 · NCATS · UNIVERSITY OF CALIFORNIA LOS ANGELES · PI DUBINETT, STEVEN M. · 2012 to 2015
$57.0M
Understanding Repetitive Behavior in AutismP50HD055784 · NICHD · UNIVERSITY OF CALIFORNIA LOS ANGELES · PI BOOKHEIMER, SUSAN Y · 2007 to 2021
$32.0M
UCLA-Caltech Medical Scientist Training ProgramT32GM008042 · NIGMS · UNIVERSITY OF CALIFORNIA LOS ANGELES · PI AJIJOLA, OLUJIMI A, DAWSON, DAVID WAYNE · 1985 to 2023
$29.9M
Research_ProjectU54HD090257 · NICHD · CHILDREN'S RESEARCH INSTITUTE · PI GUAY-WOODFORD, LISA MARIE · 2016 to 2020
$5.9M
NCATS NIH HHS UL1 TR000124NICHD NIH HHS P50 HD055784NICHD NIH HHS U54 HD090257NIGMS NIH HHS T32 GM008042
6 · The paper itself

Abstract

backgroundThe cohesin complex is a multi-subunit protein complex which regulates sister chromatid cohesion and separation during cellular division. In addition, this evolutionarily conserved protein complex plays an integral role in DNA replication, DNA repair, and the regulation of transcription. The core complex is composed of four subunits: RAD21, SMC1A, SMC3, and STAG1/2. Mutations in these proteins have been implicated in human developmental disorders collectively termed "cohesinopathies."

methodsUsing clinical exome sequencing, we have previously identified three female cases with heterozygous STAG2 mutations and overlapping syndromic phenotypes. Subsequently, a familial missense variant was identified in five male family members.

resultsWe now present the case of a 4-year-old male with developmental delay, failure to thrive, short stature, and polydactyly with a likely pathogenic STAG2 de novo missense hemizygous variant, c.3027A>T, p.Lys1009Asn. Furthermore, we compare the phenotypes of the four previously reported STAG2 variants with our case.

conclusionWe conclude that mutations in STAG2 cause a novel constellation of sex-specific cohesinopathy-related phenotypes and are furthermore, essential for neurodevelopment, human growth, and behavioral development.

Indexed as

PhenotypeAntigens, NuclearCell Cycle ProteinsChild, PreschoolCohesinsDevelopmental DisabilitiesGenetic Diseases, X-LinkedGrowth DisordersHumansMaleMutation, MissensePolydactylySyndromeAntigens, NuclearCell Cycle ProteinsCohesinsSTAG2 protein, humanclinical exome sequencingcohesin-associated genescohesin complexcohesinopathieshuman growthneurodevelopmentreanalysisSTAG2X-linked gene

Identifiers

PMID30447054
PMCPMC6393687
OpenAlexW2900875440

What OpenQuestion holds

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LicenceCC BY
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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.