Evidence map›Paper›PMID 30446745›Full record

ArticleScientific reports2018

Quenched Stochastic Optical Reconstruction Microscopy (qSTORM) with Graphene Oxide.

Ruiheng Li, Pantelis Georgiades, Henry Cox, Sorasak Phanphak, Ian S Roberts, Thomas A Waigh, Jian R Lu

Open access · goldAbstract read
In one paragraph

Article in Scientific reports, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 3 papers.

0numbers the graph read from it
0cells of the map it votes in
3citing papers in PubMed
1.3field-weighted citation impact, top 14% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

3 citing papers in PubMed, 10 citations in OpenAlex.

  1. Review
  2. Article
  3. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 1 institution in 1 country.

Ruiheng LiBiological Physics, School of Physics and Astronomy, University of Manchester, Oxford Rd., Manchester, M13 9PL, UK.ORCID http://orcid.org/0000-0003-4156-1966
Pantelis GeorgiadesBiological Physics, School of Physics and Astronomy, University of Manchester, Oxford Rd., Manchester, M13 9PL, UK.
Henry CoxBiological Physics, School of Physics and Astronomy, University of Manchester, Oxford Rd., Manchester, M13 9PL, UK.ORCID http://orcid.org/0000-0002-6815-1097
Sorasak PhanphakBiological Physics, School of Physics and Astronomy, University of Manchester, Oxford Rd., Manchester, M13 9PL, UK.
Ian S RobertsDivision of Infection, Immunity and Respiratory Medicine, Michael Smith Building, Oxford Rd., M13 9PT, Manchester, UK.ORCID http://orcid.org/0000-0002-0662-0214
Thomas A WaighBiological Physics, School of Physics and Astronomy, University of Manchester, Oxford Rd., Manchester, M13 9PL, UK. t.a.waigh@manchester.ac.uk.
Jian R LuBiological Physics, School of Physics and Astronomy, University of Manchester, Oxford Rd., Manchester, M13 9PL, UK. j.lu@manchester.ac.uk.
University of Manchester · GB

Funding

Medical Research Council MR/K015885/1
6 · The paper itself

Abstract

Quenched Stochastic Optical Reconstruction Microscopy (qSTORM) was demonstrated with graphene oxide sheets, peptides and bacteria; a method of contrast enhancement with super-resolution fluorescence microscopy. Individual sheets of graphene oxide (GO) were imaged with a resolution of 16 nm using the quenching of fluorescence emission by GO via its large Resonant Energy Transfer (RET) efficiency. The method was then extended to image self-assembled peptide aggregates (resolution 19 nm) and live bacterial cells (resolution 55 nm, the capsular structure of E. coli from urinary tract infections) with extremely low backgrounds and high contrasts (between one and two orders of magnitude contrast factor improvements that depended on the thickness of the graphene oxide layer used). Graphene oxide films combined with STORM imaging thus provide an extremely convenient method to image samples with large backgrounds due to non-specifically bound fluorophores (either due to excess labelling or autofluorescent molecules), which is a common occurrence in studies of both biological cells and soft-condensed matter. The GO quenches the fluorescence across a thin layer at distances of less than 15 nm. Graphene oxide films coated with thin layers (≤15 nm) of polystyrene, polymethylmethacrylate and polylysine are shown to be effective in producing high contrast qSTORM images, providing a convenient modulation of sample/substrate interactions. The GO coatings can also provide an increased image resolution and a factor of 2.3 improvement was observed with the peptide fibres using a feature of interest metric,when there was a large non-specifically bound background.

Identifiers

PMID30446745
PMCPMC6240082
OpenAlexW2900540319

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.