Evidence map›Paper›PMID 30446641›Full record

ArticleNature communications2018

Cellular metabolism constrains innate immune responses in early human ontogeny.

Bernard Kan, Christina Michalski, Helen Fu, Hilda H T Au, Kelsey Lee, Elizabeth A Marchant, Maye F Cheng, Emily Anderson-Baucum, Michal Aharoni-Simon, Peter Tilley and 5 more

Open access · goldAbstract read
In one paragraph

Article in Nature communications, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 29 papers.

0numbers the graph read from it
0cells of the map it votes in
29citing papers in PubMed
4.6field-weighted citation impact, top 5% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

29 citing papers in PubMed, 40 citations in OpenAlex.

  1. Article
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  7. Mechanisms driving fasting-induced protection from genotoxic injury in the small intestine.American journal of physiology. Gastrointestinal and liver physiology · 2024
    Article
  8. Invasive candidiasis.Nature reviews. Disease primers · 2024
    Review
  9. Article
  10. Candida parapsilosis complex in the clinical setting.Nature reviews. Microbiology · 2024
    Review
  11. Review
  12. Review
  13. Article
  14. Review
  15. Article
  16. Article
  17. Leucine Reconstitutes Phagocytosis-Induced Cell Death inInternational journal of molecular sciences · 2021
    Article
  18. Article
  19. Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

15 authors at 3 institutions in 3 countries.

Bernard KanBC Children's Hospital Research Institute, 950 West 28th Avenue, Vancouver, BC, V5Z 4H4, Canada.ORCID http://orcid.org/0000-0003-3188-1739
Christina MichalskiBC Children's Hospital Research Institute, 950 West 28th Avenue, Vancouver, BC, V5Z 4H4, Canada.ORCID http://orcid.org/0000-0001-9093-5325
Helen FuBC Children's Hospital Research Institute, 950 West 28th Avenue, Vancouver, BC, V5Z 4H4, Canada.
Hilda H T AuDepartment of Biochemistry and Molecular Biology, Life Sciences Institute, University of British Columbia, 5457-2350 Health Sciences Mall, Vancouver, BC, V6T 1Z3, Canada.ORCID http://orcid.org/0000-0003-1289-1851
Kelsey LeeBC Children's Hospital Research Institute, 950 West 28th Avenue, Vancouver, BC, V5Z 4H4, Canada.ORCID http://orcid.org/0000-0002-2137-1092
Elizabeth A MarchantBC Children's Hospital Research Institute, 950 West 28th Avenue, Vancouver, BC, V5Z 4H4, Canada.
Maye F ChengBC Children's Hospital Research Institute, 950 West 28th Avenue, Vancouver, BC, V5Z 4H4, Canada.
Emily Anderson-BaucumDepartments of Medicine and Pediatrics and the Center for Diabetes and Metabolic Diseases, Indiana University School of Medicine, 1044 West Walnut Street, Indianapolis, IN, 46202, USA.
Michal Aharoni-SimonBC Children's Hospital Research Institute, 950 West 28th Avenue, Vancouver, BC, V5Z 4H4, Canada.
Peter TilleyBC Children's and Women's Hospitals, 4480 Oak St, Vancouver, BC, V6H 3N1, Canada.
Raghavendra G MirmiraDepartments of Medicine and Pediatrics and the Center for Diabetes and Metabolic Diseases, Indiana University School of Medicine, 1044 West Walnut Street, Indianapolis, IN, 46202, USA.
Colin J RossBC Children's Hospital Research Institute, 950 West 28th Avenue, Vancouver, BC, V5Z 4H4, Canada.ORCID http://orcid.org/0000-0003-1476-7037
Dan S LucianiBC Children's Hospital Research Institute, 950 West 28th Avenue, Vancouver, BC, V5Z 4H4, Canada.
Eric JanDepartment of Biochemistry and Molecular Biology, Life Sciences Institute, University of British Columbia, 5457-2350 Health Sciences Mall, Vancouver, BC, V6T 1Z3, Canada.ORCID http://orcid.org/0000-0003-0523-8467
Pascal M LavoieBC Children's Hospital Research Institute, 950 West 28th Avenue, Vancouver, BC, V5Z 4H4, Canada. plavoie@cw.bc.ca.ORCID http://orcid.org/0000-0002-2205-0362
University of British Columbia · CAIndiana University School of MedicineKaplan Medical Center · IL

Funding

Translation CoreP30DK097512 · NIDDK · INDIANA UNIVERSITY INDIANAPOLIS · PI Carmella Evans-Molina · 2015 to 2026
$17.4M
Transcriptional Mechanisms Governing Beta Cell DifferentiationR01DK060581 · NIDDK · UNIVERSITY OF VIRGINIA CHARLOTTESVILLE · PI Raghavendra G Mirmira · 2002 to 2026
$8.5M
NIDDK NIH HHS P30 DK097512NIDDK NIH HHS R01 DK060581
6 · The paper itself

Abstract

Pathogen immune responses are profoundly attenuated in fetuses and premature infants, yet the mechanisms underlying this developmental immaturity remain unclear. Here we show transcriptomic, metabolic and polysome profiling and find that monocytes isolated from infants born early in gestation display perturbations in PPAR-γ-regulated metabolic pathways, limited glycolytic capacity and reduced ribosomal activity. These metabolic changes are linked to a lack of translation of most cytokines and of MALT1 signalosome genes essential to respond to the neonatal pathogen Candida. In contrast, they have little impact on house-keeping phagocytosis functions. Transcriptome analyses further indicate a role for mTOR and its putative negative regulator DNA Damage Inducible Transcript 4-Like in regulating these metabolic constraints. Our results provide a molecular basis for the broad susceptibility to multiple pathogens in these infants, and suggest that the fetal immune system is metabolically programmed to avoid energetically costly, dispensable and potentially harmful immune responses during ontogeny.

Indexed as

Gene Expression Regulation, DevelopmentalImmunity, InnateAdultB-Cell CLL-Lymphoma 10 ProteinCandida albicansCandida parapsilosisCARD Signaling Adaptor ProteinsDectin-1HumansInfant, NewbornInfant, PrematureInterleukinsLectins, C-TypeLipopolysaccharidesMicroarray AnalysisMonocytesB-Cell CLL-Lymphoma 10 ProteinBCL10 protein, humanCARD9 protein, humanCARD Signaling Adaptor ProteinsCLEC7A protein, humanDDIT4 protein, humanDectin-1InterleukinsLectins, C-TypeLipopolysaccharidesMALT1 protein, humanMTOR protein, humanMucosa-Associated Lymphoid Tissue Lymphoma Translocation 1 ProteinPPAR gammaTOR Serine-Threonine KinasesTranscription FactorsTumor Necrosis Factor-alpha

Identifiers

PMID30446641
PMCPMC6240060
OpenAlexW2901112389

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.