Evidence map›Paper›PMID 30445562›Full record

ArticleJournal of the American Medical Informatics Association : JAMIA2019

Mapping of HIE CT terms to LOINC®: analysis of content-dependent coverage and coverage improvement through new term creation.

Paul Peng, Anton Oscar Beitia, Daniel J Vreeman, George T Loo, Bradley N Delman, Frederick Thum, Tina Lowry, Jason S Shapiro

Abstract read
In one paragraph

Article in Journal of the American Medical Informatics Association : JAMIA, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 2 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
2citing papers in PubMed, 1 pooled it
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

2 citing papers in PubMed, 1 synthesis or guideline pooled it.

  1. Pooled it
  2. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors.

Paul PengDepartment of Emergency Medicine, Icahn School of Medicine at Mount Sinai, New York, New York, USA.
Anton Oscar BeitiaDepartment of Emergency Medicine, Icahn School of Medicine at Mount Sinai, New York, New York, USA.
Daniel J VreemanCenter for Biomedical Informatics, Regenstrief Institute, Inc., Indianapolis, Indiana, USA.
George T LooDepartment of Emergency Medicine, Icahn School of Medicine at Mount Sinai, New York, New York, USA.
Bradley N DelmanDepartment of Radiology, Icahn School of Medicine at Mount Sinai, New York, New York, USA.
Frederick ThumDepartment of Emergency Medicine, Icahn School of Medicine at Mount Sinai, New York, New York, USA.
Tina LowryDepartment of Emergency Medicine, Icahn School of Medicine at Mount Sinai, New York, New York, USA.
Jason S ShapiroDepartment of Emergency Medicine, Icahn School of Medicine at Mount Sinai, New York, New York, USA.

Funding

Terminology Services to Reduce Avoidable CT ImagingR01LM012196 · NLM · ICAHN SCHOOL OF MEDICINE AT MOUNT SINAI · PI SHAPIRO, JASON SCOTT · 2015 to 2017
$1.6M
NLM NIH HHS R01 LM012196
6 · The paper itself

Abstract

Objective: We describe and evaluate the mapping of computerized tomography (CT) terms from 40 hospitals participating in a health information exchange (HIE) to a standard terminology. Methods: Proprietary CT exam terms and corresponding exam frequency data were obtained from 40 participant HIE sites that transmitted radiology data to the HIE from January 2013 through October 2015. These terms were mapped to the Logical Observations Identifiers Names and Codes (LOINC®) terminology using the Regenstrief LOINC mapping assistant (RELMA) beginning in January 2016. Terms without initial LOINC match were submitted to LOINC as new term requests on an ongoing basis. After new LOINC terms were created, proprietary terms without an initial match were reviewed and mapped to these new LOINC terms where appropriate. Content type and token coverage were calculated for the LOINC version at the time of initial mapping (v2.54) and for the most recently released version at the time of our analysis (v2.63). Descriptive analysis was performed to assess for significant differences in content-dependent coverage between the 2 versions. Results: LOINC's content type and token coverages of HIE CT exam terms for version 2.54 were 83% and 95%, respectively. Two-hundred-fifteen new LOINC CT terms were created in the interval between the releases of version 2.54 and 2.63, and content type and token coverages, respectively, increased to 93% and 99% (P < .001). Conclusion: LOINC's content type coverage of proprietary CT terms across 40 HIE sites was 83% but improved significantly to 93% following new term creation.

Indexed as

Health Information ExchangeLogical Observation Identifiers Names and CodesHumansRadiology Information SystemsTomography, X-Ray Computed

Identifiers

PMID30445562
PMCPMC7587153

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.