Evidence map›Paper›PMID 30444549›Full record

ArticleThe Plant journal : for cell and molecular biology2019

A Förster resonance energy transfer sensor for live-cell imaging of mitogen-activated protein kinase activity in Arabidopsis.

Najia Zaman, Kati Seitz, Mohiuddin Kabir, Lauren St George-Schreder, Ian Shepstone, Yidong Liu, Shuqun Zhang, Patrick J Krysan

Open access · bronzeAbstract read
In one paragraph

Article in The Plant journal : for cell and molecular biology, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 14 papers.

0numbers the graph read from it
0cells of the map it votes in
14citing papers in PubMed
1.3field-weighted citation impact, top 19% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

14 citing papers in PubMed, 28 citations in OpenAlex.

  1. Article
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  6. Review
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  9. Article
  10. Nuclear Localization of HopA1Plants (Basel, Switzerland) · 2021
    Article
  11. Review
  12. Sustained Incompatibility between MAPK Signaling and Pathogen Effectors.International journal of molecular sciences · 2020
    Review
  13. Article
  14. Article
4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

8 authors at 2 institutions in 1 country.

Najia ZamanHorticulture Department, University of Wisconsin-Madison, Madison, WI, USA.
Kati SeitzLaboratory of Genetics, University of Wisconsin-Madison, Madison, WI, USA.
Mohiuddin KabirHorticulture Department, University of Wisconsin-Madison, Madison, WI, USA.
Lauren St George-SchrederHorticulture Department, University of Wisconsin-Madison, Madison, WI, USA.
Ian ShepstoneHorticulture Department, University of Wisconsin-Madison, Madison, WI, USA.
Yidong LiuDivision of Biochemistry, Interdisciplinary Plant Group, Bond Life Sciences Center, University of Missouri, Columbia, MO, USA.
Shuqun ZhangDivision of Biochemistry, Interdisciplinary Plant Group, Bond Life Sciences Center, University of Missouri, Columbia, MO, USA.
Patrick J KrysanHorticulture Department, University of Wisconsin-Madison, Madison, WI, USA.
University of Wisconsin–Madison · USUniversity of Missouri · US

Funding

PREDOCTORAL TRAINING PROGRAM IN GENETICST32GM007133 · NIGMS · UNIVERSITY OF WISCONSIN-MADISON · PI PERNA, NICOLE T · 1985 to 2023
$16.5M
NIGMS NIH HHS T32 GM007133
6 · The paper itself

Abstract

The catalytic activity of mitogen-activated protein kinases (MAPKs) is dynamically modified in plants. Since MAPKs have been shown to play important roles in a wide range of signaling pathways, the ability to monitor MAPK activity in living plant cells would be valuable. Here, we report the development of a genetically encoded MAPK activity sensor for use in Arabidopsis thaliana. The sensor is composed of yellow and blue fluorescent proteins, a phosphopeptide binding domain, a MAPK substrate domain and a flexible linker. Using in vitro testing, we demonstrated that phosphorylation causes an increase in the Förster resonance energy transfer (FRET) efficiency of the sensor. The FRET efficiency can therefore serve as a readout of kinase activity. We also produced transgenic Arabidopsis lines expressing this sensor of MAPK activity (SOMA) and performed live-cell imaging experiments using detached cotyledons. Treatment with NaCl, the synthetic flagellin peptide flg22 and chitin all led to rapid gains in FRET efficiency. Control lines expressing a version of SOMA in which the phosphosite was mutated to an alanine did not show any substantial changes in FRET. We also expressed the sensor in a conditional loss-of-function double-mutant line for the Arabidopsis MAPK genes MPK3 and MPK6. These experiments demonstrated that MPK3/6 are necessary for the NaCl-induced FRET gain of the sensor, while other MAPKs are probably contributing to the chitin and flg22-induced increases in FRET. Taken together, our results suggest that SOMA is able to dynamically report MAPK activity in living plant cells.

Indexed as

MAP Kinase Signaling SystemArabidopsisArabidopsis ProteinsChitinCotyledonFlagellinFluorescence Resonance Energy TransferMitogen-Activated Protein Kinase KinasesMitogen-Activated Protein KinasesPhosphorylationSodium ChlorideArabidopsis ProteinsAtMPK3 protein, ArabidopsisChitinFlagellinMitogen-Activated Protein Kinase KinasesMitogen-Activated Protein KinasesMPK6 protein, ArabidopsisSodium ChlorideArabidopsis thalianaFRET sensorlive-cell imagingMAP kinasetechnical advance

Identifiers

PMID30444549
PMCPMC6750906
OpenAlexW2900553642

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.