Evidence map›Paper›PMID 30444300›Full record

ArticleMicrobiologyOpen2019

Pressure and temperature effects on deep-sea hydrocarbon-degrading microbial communities in subarctic sediments.

Luis J Perez Calderon, Evangelia Gontikaki, Lloyd D Potts, Sophie Shaw, Alejandro Gallego, James A Anderson, Ursula Witte

Open access · goldAbstract read
In one paragraph

Article in MicrobiologyOpen, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 13 papers.

0numbers the graph read from it
0cells of the map it votes in
13citing papers in PubMed
2.0field-weighted citation impact, top 15% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

13 citing papers in PubMed, 31 citations in OpenAlex.

  1. Review
  2. Article
  3. Article
  4. The phylogeny and metabolic potentials of anFrontiers in microbiology · 2023
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  7. Article
  8. Review
  9. Characterization and Transcriptome Analysis of a Long-ChainInternational journal of environmental research and public health · 2021
    Article
  10. Review
  11. Article
  12. Article
  13. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 2 institutions in 1 country.

Luis J Perez CalderonInstitute of Biological and Environmental Science, University of Aberdeen, Aberdeen, UK.ORCID 0000-0002-0603-2914
Evangelia GontikakiInstitute of Biological and Environmental Science, University of Aberdeen, Aberdeen, UK.
Lloyd D PottsInstitute of Biological and Environmental Science, University of Aberdeen, Aberdeen, UK.
Sophie ShawCentre for Genome Enabled Biology and Medicine, University of Aberdeen, Aberdeen, UK.
Alejandro GallegoMarine Laboratory Aberdeen, Marine Scotland Science, Aberdeen, UK.
James A AndersonSurface Chemistry and Catalysis Group, Materials and Chemical Engineering, School of Engineering, University of Aberdeen, Aberdeen, UK.
Ursula WitteInstitute of Biological and Environmental Science, University of Aberdeen, Aberdeen, UK.
University of Aberdeen · GBMarine Scotland · GB

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The Hatton-Rockall Basin (North-East Atlantic) is an area with potential for deep-sea (2,900 m) hydrocarbon exploration. Following the Deepwater Horizon oil spill, many investigations into the responses of sediment microbial communities to oil pollution have been undertaken. However, hydrostatic pressure is a parameter that is often omitted due to the technical difficulties associated with conducting experiments at high pressure (>10 MPa). In this study, sediments from 2,900 m in the Hatton-Rockall Basin, following a one-week decompression period in a temperature-controlled room at 5°C, were incubated in factorial combinations of 0.1 and 30 MPa, 5 and 20°C, and contamination with a hydrocarbon mixture or uncontaminated controls to evaluate the effect of these environmental variables on the bacterial community composition. Our results revealed varying effects of pressure, temperature, and oil contamination on the composition of the bacterial community within the sediment. Temperature was the strongest determinant of differences in the bacterial community structure between samples followed by pressure. Oil contamination did not exert a strong change in the sediment bacterial community structure when pressure and temperature conditions were held at in situ levels (30 MPa and 5°C). The γ-proteobacteria Pseudomonas and Colwellia, and several Bacteroidetes dominated communities at 30 MPa. In contrast, hydrocarbon degraders such as Halomonas, Alcanivorax, and Marinobacter decreased in relative abundance at the same pressure. This study highlights the importance of considering hydrostatic pressure in ex situ investigations into hydrocarbon-degrading deepwater microbial communities.

Indexed as

BacteriaBiodiversityGeologic SedimentsHydrocarbonsHydrostatic PressureMicrobiotaPhylogenyPressureSeawaterTemperatureHydrocarbonsbacteriadeep-seahydrocarbon contaminationhydrostatic pressuresedimenttemperature

Identifiers

PMID30444300
PMCPMC6562134
OpenAlexW2900704791

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.