Evidence map›Paper›PMID 30442664›Full record

ArticleProceedings of the National Academy of Sciences of the United States of America2018

pH-dependent thermodynamic intermediates of pHLIP membrane insertion determined by solid-state NMR spectroscopy.

Sarah A Otieno, Samuel Z Hanz, Bianca Chakravorty, Anqi Zhang, Lukas M Klees, Ming An, Wei Qiang

Abstract readEvaluation Study
In one paragraph

Article in Proceedings of the National Academy of Sciences of the United States of America, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 14 papers.

0numbers the graph read from it
0cells of the map it votes in
14citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

14 citing papers in PubMed.

  1. Article
  2. Article
  3. Article
  4. Review
  5. Article
  6. Arginine Residues Modulate the Membrane Interactions of pHLIP Peptides.Journal of chemical information and modeling · 2023
    Article
  7. CaProtein science : a publication of the Protein Society · 2022
    Article
  8. Article
  9. Article
  10. Article
  11. Kinetics of pHLIP peptide insertion into and exit from a membrane.Proceedings of the National Academy of Sciences of the United States of America · 2020
    Article
  12. Review
  13. Article
  14. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors.

Sarah A OtienoDepartment of Chemistry, Binghamton University, The State University of New York, Binghamton, NY 13902.
Samuel Z HanzDepartment of Chemistry, Binghamton University, The State University of New York, Binghamton, NY 13902.
Bianca ChakravortyDepartment of Chemistry, Binghamton University, The State University of New York, Binghamton, NY 13902.
Anqi ZhangDepartment of Chemistry, Binghamton University, The State University of New York, Binghamton, NY 13902.
Lukas M KleesDepartment of Chemistry, Binghamton University, The State University of New York, Binghamton, NY 13902.
Ming AnDepartment of Chemistry, Binghamton University, The State University of New York, Binghamton, NY 13902 aming@binghamton.edu wqiang@binghamton.edu.
Wei QiangDepartment of Chemistry, Binghamton University, The State University of New York, Binghamton, NY 13902 aming@binghamton.edu wqiang@binghamton.edu.

Funding

Rational Design of pH-Low Insertion Peptides for Cargo DeliveryR15GM128150 · NIGMS · STATE UNIVERSITY OF NY,BINGHAMTON · PI AN, MING · 2018 to 2018
$450k
NIGMS NIH HHS R15 GM128150
6 · The paper itself

Abstract

The applications of the pH low insertion peptide (pHLIP) in cancer diagnosis and cross-membrane cargo delivery have drawn increasing attention in the past decade. With its origin as the transmembrane (TM) helix C of bacteriorhodopsin, pHLIP is also an important model for understanding how pH can affect the folding and topogenesis of a TM α-helix. Protonations of multiple D/E residues transform pHLIP from an unstructured coil at membrane surface (known as state II, at pH ≥ 7) to a TM α-helix (state III, pH ≤ 5.3). While these initial and end states of pHLIP insertion have been firmly established, what happens at the intervening pH values is less clear. However, the intervening pH range is most relevant to pHLIP-cell interactions in the acidic extracellular tumor environment (and in the endosomes within cells). Here, using advanced solid-state NMR spectroscopy with palmitoyl-2-oleoyl-

Indexed as

BacteriorhodopsinsCell MembraneHydrogen-Ion ConcentrationMagnetic Resonance SpectroscopyMembrane ProteinsProtein Conformation, alpha-HelicalProtein TransportThermodynamicsBacteriorhodopsinsMembrane ProteinspHLIP proteinintermediate stateslipid dynamicsmembrane insertionpH low insertion peptidesolid-state nuclear magnetic resonance spectroscopy

Identifiers

PMID30442664
PMCPMC6275479

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.