Evidence map›Paper›PMID 30441735›Full record

ArticleAnnual International Conference of the IEEE Engineering in Medicine and Biology Society. IEEE Engineering in Medicine and Biology Society. Annual International Conference2018

Decoding Position to Analyze Spatial Information Encoding in a Large-Scale Neuronal Network Model of Rat Dentate Gyrus.

Gene J Yu, Jean-Marie C Bouteiller, Dong Song, Theodore W Berger

Abstract read
In one paragraph

Article in Annual International Conference of the IEEE Engineering in Medicine and Biology Society. IEEE Engineering in Medicine and Biology Society. Annual International Conference, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 4 papers.

0numbers the graph read from it
0cells of the map it votes in
4citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

4 citing papers in PubMed.

  1. Article
  2. Article
  3. Article
  4. Network Activity Due to Topographic Organization of Schaffer Collaterals in a Large-Scale Model of Rat CA1.Annual International Conference of the IEEE Engineering in Medicine and Biology Society. IEEE Engineering in Medicine and Biology Society. Annual International Conference · 2019
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors.

Gene J Yu
Jean-Marie C Bouteiller
Dong Song
Theodore W Berger

Funding

TrainingP41EB001978 · NIBIB · UNIVERSITY OF SOUTHERN CALIFORNIA · PI KHOO, MICHAEL C K · 2003 to 2017
$18.1M
Predictive modeling of bioelectric activity on mammalian multilayered neuronal stU01GM104604 · NIGMS · UNIVERSITY OF UTAH · PI BERGER, THEODORE W., LAZZI, GIANLUCA · 2012 to 2016
$2.8M
NIBIB NIH HHS P41 EB001978NIGMS NIH HHS U01 GM104604
6 · The paper itself

Abstract

Spatial information is encoded by the hippocampus, and the factors that contribute to the amount of information that can be encoded and the transformation of spatial information through the trisynaptic circuit remain an important issue. A large-scale neuronal network model of the rat entorhinal-dentate system was developed with multicompartmental representations of the neurons within the dentate gyrus. Spatial information was introduced to the network via grid cell activity, and the spatial information encoding capabilities of the network were assessed using a recursive decoding algorithm to estimate the position of a virtual rat using the dentate activity. To obtain a measure for the information that the network could convey, decoding error was calculated for different decoding population sizes. Decoding error decreased exponentially as a function of population size. Therefore, the time constant and the asymptote of the error curve could be used as metrics to compare the changes in encoding performance. In conjunction with the large-scale model, this paradigm can be used to characterize how neural properties, network composition, and the interactions between different subfields affect spatial information encoding.

Indexed as

Dentate GyrusNeuronsAlgorithmsAnimalsEntorhinal CortexRats

Identifiers

PMID30441735
PMCPMC6391309

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.