Evidence map›Paper›PMID 30440041›Full record

ArticlePloS one2018

Genetic diversity of symbiotic bacteria nodulating common bean (Phaseolus vulgaris) in western Kenya.

Fanuel Kawaka, Huxley Makonde, Mathews Dida, Peter Opala, Omwoyo Ombori, John Maingi, John Muoma

Abstract read
In one paragraph

Article in PloS one, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 11 papers.

0numbers the graph read from it
0cells of the map it votes in
11citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

11 citing papers in PubMed.

  1. Article
  2. Article
  3. Review
  4. Article
  5. Review
  6. Review
  7. Diversity of rhizobial and non-rhizobial bacteria nodulating wild ancestors of grain legume crop plants.International microbiology : the official journal of the Spanish Society for Microbiology · 2021
    Article
  8. Article
  9. Article
  10. Review
  11. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors.

Fanuel KawakaDepartment of Applied Plant Sciences, Maseno University, Maseno, Kenya.ORCID 0000-0002-3922-551X
Huxley MakondeDepartment of Pure and Applied Sciences, Technical University of Mombasa, Mombasa, Kenya.
Mathews DidaDepartment of Applied Plant Sciences, Maseno University, Maseno, Kenya.
Peter OpalaDepartment of Soil Science, Maseno University, Maseno, Kenya.
Omwoyo OmboriDepartment of Plant Sciences, Kenyatta University, Nairobi, Kenya.
John MaingiDepartment of Microbiology, Kenyatta University, Nairobi, Kenya.
John MuomaDepartment of Biological Sciences, Masinde Muliro University of Science and Technology, Kakamega, Kenya.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Biological nitrogen fixation (BNF) in legumes plays a critical role in improving soil fertility. Despite this vital role, there is limited information on the genetic diversity and BNF of bacteria nodulating common bean (Phaseolus vulgaris L.). This study evaluated the genetic diversity and symbiotic nitrogen fixation of bacteria nodulating common bean in soils of Western Kenya. The genetic diversity was determined using 16S rRNA gene partial sequences while BNF was estimated in a greenhouse experiment. The sequences of the native isolates were closely affiliated with members from the genera Pantoea, Klebsiella, Rhizobium, Enterobacter and Bacillus. These results show that apart from rhizobia, there are non-rhizobial strains in the nodules of common bean. The symbiotic efficiency (SE) of native isolates varied and exhibited comparable or superior BNF compared to the local commercial inoculants (CIAT 899 and Strain 446). Isolates (MMUST 003 [KP027691], MMUST 004 [KP027687], MMUST 005 [KP027688], KSM 001 [KP027682], KSM 002 [KP027680], KSM 003 [KP027683] and KSM 005 [KP027685]) recorded equal or significantly higher SE (p < 0.05) compared to N supplemented treatments. The results demonstrate the presence of genetic diversity of native bacteria nodulating bean that are effective in N fixation. These elite bacterial strains should be exploited as candidates for the development of Phaseolus vulgaris inoculants.

Indexed as

BacteriaKenyaNitrogen FixationPhaseolusRNA, BacterialRNA, Ribosomal, 16SRoot Nodules, PlantSymbiosisRNA, BacterialRNA, Ribosomal, 16S

Identifiers

PMID30440041
PMCPMC6237360

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.