Evidence map›Paper›PMID 30429995›Full record

ArticleChemical science2018

Activity-based ubiquitin-protein probes reveal target protein specificity of deubiquitinating enzymes.

Ping Gong, Gregory A Davidson, Weijun Gui, Kun Yang, William P Bozza, Zhihao Zhuang

Open access · diamondAbstract read
In one paragraph

Article in Chemical science, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 21 papers.

0numbers the graph read from it
0cells of the map it votes in
21citing papers in PubMed
1.3field-weighted citation impact, top 20% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

21 citing papers in PubMed, 31 citations in OpenAlex.

  1. Article
  2. Synthetic Strategies for Activity-Based Probes to Decode Ubiquitin-Like Modifiers.Chemistry (Weinheim an der Bergstrasse, Germany) · 2026
    Review
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  11. Review
  12. The Ubiquitin Proteasome System and Skin Fibrosis.Molecular diagnosis & therapy · 2021
    Review
  13. Beyond the Lesion: Back to High Fidelity DNA Synthesis.Frontiers in molecular biosciences · 2021
    Review
  14. Article
  15. Article
  16. Assay Systems for Profiling Deubiquitinating Activity.International journal of molecular sciences · 2020
    Review
  17. Review
  18. Article
  19. Review
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 1 institution in 2 countries.

Ping GongDepartment of Chemistry and Biochemistry , University of Delaware , 214A Drake Hall , Newark , DE , USA 19716 . Email: zzhuang@udel.edu.
Gregory A DavidsonDepartment of Chemistry and Biochemistry , University of Delaware , 214A Drake Hall , Newark , DE , USA 19716 . Email: zzhuang@udel.edu.
Weijun GuiDepartment of Chemistry and Biochemistry , University of Delaware , 214A Drake Hall , Newark , DE , USA 19716 . Email: zzhuang@udel.edu.
Kun YangDepartment of Chemistry and Biochemistry , University of Delaware , 214A Drake Hall , Newark , DE , USA 19716 . Email: zzhuang@udel.edu.
William P BozzaDepartment of Chemistry and Biochemistry , University of Delaware , 214A Drake Hall , Newark , DE , USA 19716 . Email: zzhuang@udel.edu.
Zhihao ZhuangDepartment of Chemistry and Biochemistry , University of Delaware , 214A Drake Hall , Newark , DE , USA 19716 . Email: zzhuang@udel.edu.ORCID 0000-0001-5047-9222
Newark Hospital · GB

Funding

Pilot Research Subproject ProgramP30GM110758 · NIGMS · UNIVERSITY OF DELAWARE · PI PATEL, SANDEEP · 2014 to 2018
$5.8M
Regulation and specificity of deubiquitylating enzyme complexR01GM097468 · NIGMS · UNIVERSITY OF DELAWARE · PI ZHUANG, ZHIHAO · 2012 to 2016
$1.3M
Developing ubiquitin chain- and target-specific deubiquitinase probesR21NS085509 · NINDS · UNIVERSITY OF DELAWARE · PI ZHUANG, ZHIHAO · 2014 to 2015
$429k
NIGMS NIH HHS P30 GM110758NIGMS NIH HHS R01 GM097468NINDS NIH HHS R21 NS085509
6 · The paper itself

Abstract

Ubiquitination is an essential eukaryotic post-translational modification that regulates various cellular processes. The removal of ubiquitin from its target protein is catalyzed by deubiquitinating enzymes (DUBs). Although it was proposed that many DUBs specifically interact and recognize ubiquitinated proteins as substrates, more direct evidence is needed to support this notion. Here we report protein-targeting activity-based DUB probes that allowed the identification of DUBs recognizing monoubiquitinated proliferating cell nuclear antigen (PCNA) in

Identifiers

PMID30429995
PMCPMC6194582
OpenAlexW2888834891

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.