Evidence map›Paper›PMID 30429605›Full record

ArticleNature chemical biology2018

Synthesis of 11-carbon terpenoids in yeast using protein and metabolic engineering.

Codruta Ignea, Marianna Pontini, Mohammed S Motawia, Massimo E Maffei, Antonios M Makris, Sotirios C Kampranis

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In one paragraph

Article in Nature chemical biology, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 37 papers.

0numbers the graph read from it
0cells of the map it votes in
37citing papers in PubMed
4.4field-weighted citation impact, top 4% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

37 citing papers in PubMed, 101 citations in OpenAlex.

  1. Article
  2. Review
  3. Article
  4. Article
  5. Article
  6. Article
  7. Review
  8. Article
  9. Article
  10. The microbial biosynthesis of noncanonical terpenoids.Applied microbiology and biotechnology · 2024
    Review
  11. Review
  12. Article
  13. Article
  14. Article
  15. Article
  16. High Versatility of IPP and DMAPP Methyltransferases Enables Synthesis of CChembiochem : a European journal of chemical biology · 2022
    Article
  17. Odor Characteristics of Novel Non-Canonical Terpenes.Molecules (Basel, Switzerland) · 2022
    Article
  18. Article
  19. The stereochemical course of 2-methylisoborneol biosynthesis.Beilstein journal of organic chemistry · 2022
    Article
  20. Microbial production of advanced biofuels.Nature reviews. Microbiology · 2021
    Review
4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

6 authors at 4 institutions in 3 countries.

Codruta Ignea *Department of Plant and Environmental Sciences, University of Copenhagen, Copenhagen, Denmark.
Marianna Pontini *Mediterranean Agronomic Institute of Chania, Chania, Greece.
Mohammed S MotawiaDepartment of Plant and Environmental Sciences, University of Copenhagen, Copenhagen, Denmark.
Massimo E MaffeiDepartment of Life Sciences and Systems Biology, University of Turin, Turin, Italy.ORCID http://orcid.org/0000-0001-6814-2353
Antonios M MakrisInstitute of Applied Biosciences, Centre for Research and Technology Hellas, Thessaloniki, Greece.
Sotirios C KampranisDepartment of Plant and Environmental Sciences, University of Copenhagen, Copenhagen, Denmark. soka@plen.ku.dk.ORCID http://orcid.org/0000-0001-6208-1684
University of Copenhagen · DKCentre for Research and Technology Hellas · GRMediterranean Agronomic Institute of Chania · GRUniversity of Turin · IT

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

One application of synthetic biology is the redesign of existing biological systems to acquire new functions. In this context, expanding the chemical code underlying key biosynthetic pathways will lead to the synthesis of compounds with new structures and potentially new biological activities. Terpenoids are a large group of specialized metabolites with numerous applications. Yet, being synthesized from five-carbon units, they are restricted to distinct classes that differ by five carbon atoms (C10, C15, C20, etc.). To expand the diversity of terpenoid structures, we engineered yeast cells to synthesize a noncanonical building block with 11 carbons, and produced 40 C11 terpene scaffolds that can form the basis for an entire terpenoid class. By identifying a single-residue switch that converts C10 plant monoterpene synthases to C11-specific enzymes, we engineered dedicated synthases for C11 terpene production. This approach will enable the systematic expansion of the chemical space accessed by terpenoids.

Indexed as

Alkyl and Aryl TransferasesCyanobacteriaDiphosphatesDiterpenesMetabolic EngineeringProtein EngineeringRecombinant ProteinsSaccharomyces cerevisiaeSynthetic BiologyTerpenesAlkyl and Aryl TransferasesDiphosphatesDiterpenesgeranyl diphosphateRecombinant ProteinsTerpenesterpene synthase

Identifiers

PMID30429605
OpenAlexW2900473000

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.