Evidence map›Paper›PMID 30428850›Full record

ArticleBMC infectious diseases2018

Field suitability and diagnostic accuracy of the Biocentric® open real-time PCR platform for plasma-based HIV viral load quantification in Swaziland.

Bernhard Kerschberger, Qhubekani Mpala, Paola Andrea Díaz Uribe, Gugu Maphalala, Roberto de la Tour, Sydney Kalombola, Addis Bekele, Tiwonge Chawinga, Mukelo Mliba, Nombuso Ntshalintshali and 6 more

Abstract readEvaluation Study
In one paragraph

Article in BMC infectious diseases, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 2 papers.

0numbers the graph read from it
0cells of the map it votes in
2citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

2 citing papers in PubMed.

  1. Article
  2. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

16 authors.

Bernhard KerschbergerMedecins Sans Frontieres (OCG), P.O. Box 18, Eveni, Lot No. 331, Sheffield Road, Industrial Area, Mbabane, Swaziland. bernhard.kerschberger@gmail.com.ORCID http://orcid.org/0000-0003-0525-7262
Qhubekani MpalaMedecins Sans Frontieres (OCG), P.O. Box 18, Eveni, Lot No. 331, Sheffield Road, Industrial Area, Mbabane, Swaziland.
Paola Andrea Díaz UribeMedecins Sans Frontieres (OCG), P.O. Box 18, Eveni, Lot No. 331, Sheffield Road, Industrial Area, Mbabane, Swaziland.
Gugu MaphalalaMinistry of Health (National Reference Laboratory), Mbabane, Swaziland.
Roberto de la TourMedecins Sans Frontieres (OCG), Geneva, Switzerland.
Sydney KalombolaMedecins Sans Frontieres (OCG), P.O. Box 18, Eveni, Lot No. 331, Sheffield Road, Industrial Area, Mbabane, Swaziland.
Addis BekeleMedecins Sans Frontieres (OCG), P.O. Box 18, Eveni, Lot No. 331, Sheffield Road, Industrial Area, Mbabane, Swaziland.
Tiwonge ChawingaMedecins Sans Frontieres (OCG), P.O. Box 18, Eveni, Lot No. 331, Sheffield Road, Industrial Area, Mbabane, Swaziland.
Mukelo MlibaMedecins Sans Frontieres (OCG), P.O. Box 18, Eveni, Lot No. 331, Sheffield Road, Industrial Area, Mbabane, Swaziland.
Nombuso NtshalintshaliClinton Health Access Initiative (CHAI), Mbabane, Swaziland.
Nomcebo PhugwayoMinistry of Health (National Reference Laboratory), Mbabane, Swaziland.
Serge Mathurin KaboreMedecins Sans Frontieres (OCG), P.O. Box 18, Eveni, Lot No. 331, Sheffield Road, Industrial Area, Mbabane, Swaziland.
Javier GoiriMedecins Sans Frontieres (OCG), Geneva, Switzerland.
Sindisiwe DlaminiMinistry of Health (National Reference Laboratory), Mbabane, Swaziland.
Iza CigleneckiMedecins Sans Frontieres (OCG), Geneva, Switzerland.
Emmanuel FajardoMedecins Sans Frontieres (Access Campaign), Geneva, Switzerland.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

backgroundViral load (VL) testing is being scaled up in resource-limited settings. However, not all commercially available VL testing methods have been evaluated under field conditions. This study is one of a few to evaluate the Biocentric platform for VL quantification in routine practice in Sub-Saharan Africa.

methodsVenous blood specimens were obtained from patients eligible for VL testing at two health facilities in Swaziland from October 2016 to March 2017. Samples were centrifuged at two laboratories (LAB-1, LAB-2) to obtain paired plasma specimens for VL quantification with the national reference method and on the Biocentric platform. Agreement (correlation, Bland-Altman) and accuracy (sensitivity, specificity) indicators were calculated at the VL thresholds of 416 (2.62 log

resultsA total of 364 paired plasma samples (LAB-1: n = 198; LAB-2: n = 166) were successfully tested using both methods. The correlation was high (R = 0.82, p < 0.01), and the Bland-Altman analysis showed a minimal mean difference (- 0.03 log

conclusionsThe test characteristics of the Biocentric platform were overall comparable to the national reference method for VL quantification. One laboratory tended to misclassify VL results downwards, likely owing to unmet training needs and lack of previous hands-on practice.

Indexed as

AdolescentAdultDiagnostic Tests, RoutineEswatiniFemaleHIV-1HIV InfectionsHumansMaleMiddle AgedPoint-of-Care SystemsPredictive Value of TestsReal-Time Polymerase Chain ReactionReproducibility of ResultsRNA, ViralSensitivity and SpecificityRNA, ViralAccuracyBiocentricHIVOpen platformSwazilandViral load

Identifiers

PMID30428850
PMCPMC6236955

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.