Evidence map›Paper›PMID 30426332›Full record

ArticleEuropean journal of clinical microbiology & infectious diseases : official publication of the European Society of Clinical Microbiology2019

Evaluation of matrix-assisted laser desorption/ionization time-of-flight mass spectrometry for identifying Burkholderia pseudomallei and Burkholderia thailandensis isolates.

Jin Li, Weiwei Hu, Fengling Zhang, Min Li, Chenglong Rao, Weiping Lu

Abstract read
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Article in European journal of clinical microbiology & infectious diseases : official publication of the European Society of Clinical Microbiology, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 5 papers.

0numbers the graph read from it
0cells of the map it votes in
5citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

5 citing papers in PubMed.

  1. Automatic Identification of MALDI-TOF MS Database Using ClassicalComputational and mathematical methods in medicine · 2022
    Article
  2. Article
  3. Article
  4. Article
  5. Preliminary Evaluation of Rapid Visual Identification ofFrontiers in cellular and infection microbiology · 2021
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors.

Jin LiDepartment of Laboratory Medicine, Institute of Surgery Research, Daping Hospital, Army Medical University, Chongqing, 400042, People's Republic of China.
Weiwei HuDepartment of Respiratory and Critical Care Medicine, The first affiliated Hospital of Chongqing Medical University, Chongqing, 400016, People's Republic of China.
Fengling ZhangDepartment of Laboratory Medicine, Institute of Surgery Research, Daping Hospital, Army Medical University, Chongqing, 400042, People's Republic of China.
Min LiDepartment of Laboratory Medicine, Institute of Surgery Research, Daping Hospital, Army Medical University, Chongqing, 400042, People's Republic of China.
Chenglong RaoDepartment of Clinical Microbiology and Immunology, College of Medical Laboratory Science, Army Medical University, Chongqing, 400038, People's Republic of China.
Weiping LuDepartment of Laboratory Medicine, Institute of Surgery Research, Daping Hospital, Army Medical University, Chongqing, 400042, People's Republic of China. luweiping19710416@163.com.ORCID http://orcid.org/0000-0003-3356-5537

Funding

the Special Project of the "Twelfth Five-year Plan" for Medical Science Development of the PLA (AWS14C003-2) AWS14C003-2
6 · The paper itself

Abstract

Since Burkholderia thailandensis is included in the reference spectra of the VITEK MS libraries rather than Burkholderia pseudomallei, B. pseudomallei cannot be correctly identified in the current version of VITEK MS. This study was undertaken to evaluate the utility of matrix-assisted laser desorption/ionization time-of-flight mass spectrometry (MALDI-TOF MS) with the VITEK MS plus system in the detection of B. pseudomallei and B. thailandensis isolates. For each species, we increased the reference spectra, and then, a SuperSpectrum was created based on the selection of 39 specific masses. In a second step, we validated the SuperSpectra with 106 isolates identified by 16S rRNA gene sequencing. The results showed that there was 100% agreement between the validation strains analyzed by MALDI-TOF MS and those evaluated using 16S rRNA gene sequencing analysis methods. Therefore, MALDI-TOF MS is a promising, rapid, and economical method to monitor the outbreaks and spread of B. pseudomallei and B. thailandensis isolates.

Indexed as

BurkholderiaBurkholderia InfectionsCluster AnalysisDNA, BacterialHumansMolecular TypingReproducibility of ResultsRNA, Ribosomal, 16SSpectrometry, Mass, Matrix-Assisted Laser Desorption-IonizationDNA, BacterialRNA, Ribosomal, 16S16S rRNA gene sequencing analysisBurkholderia pseudomalleiBurkholderia thailandensisMatrix-assisted laser desorption/ionization time-of-flight mass spectrometrySuperSpectra

Identifiers

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.