Evidence map›Paper›PMID 30424739›Full record

ArticleBMC medical genetics2018

A novel splicing mutation in the PKD1 gene causes autosomal dominant polycystic kidney disease in a Chinese family: a case report.

Peiwen Xu, Sexing Huang, Jie Li, Yang Zou, Ming Gao, Ranran Kang, Junhao Yan, Xuan Gao, Yuan Gao

Open access · goldAbstract readCase Reports
In one paragraph

Article in BMC medical genetics, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 2 papers.

0numbers the graph read from it
0cells of the map it votes in
2citing papers in PubMed
0.4field-weighted citation impact, top 29% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

2 citing papers in PubMed, 2 citations in OpenAlex.

  1. Review
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 2 institutions in 3 countries.

Peiwen XuCenter for Reproductive Medicine, Shandong University, Jinan, 250001, China.
Sexing HuangCenter for Reproductive Medicine, Shandong University, Jinan, 250001, China.
Jie LiCenter for Reproductive Medicine, Shandong University, Jinan, 250001, China.
Yang ZouCenter for Reproductive Medicine, Shandong University, Jinan, 250001, China.
Ming GaoCenter for Reproductive Medicine, Shandong University, Jinan, 250001, China.
Ranran KangCenter for Reproductive Medicine, Shandong University, Jinan, 250001, China.
Junhao YanCenter for Reproductive Medicine, Shandong University, Jinan, 250001, China.
Xuan GaoCenter for Reproductive Medicine, Shandong University, Jinan, 250001, China. gaoxuan@sduivf.com.
Yuan GaoCenter for Reproductive Medicine, Shandong University, Jinan, 250001, China. gaoyuan@sduivf.com.ORCID 0000-0002-7644-2994
Ministry of Education of the People's Republic of China · CNShandong University · CN

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

backgroundAutosomal dominant polycystic kidney disease (ADPKD) is the most common monogenic renal disorder in humans, affecting 1 in 400 to 1000 individuals. Mutations PKD1 (which accounts for 85% of ADPKD and produces polycystin-1) and PKD2 (produces polycystin-2) are responsible for this disease. These two polycystins are critical for maintaining normal renal tubular structures during kidney development. CASE PRESENTATION: We performed genetic analysis on a family with ADPKD. DNA samples extracted from ADPKD patient blood were subject to targeted Next generation sequencing for human a panel of renal disease-related genes. A splicing mutation, c.2854-3C > G (also known as IVS11-3C > G), in the PKD1 gene was found in the 3 patients from the family, but was not found in four unaffected relatives and 100 normal control samples. Reverse transcription-PCR (RT-PCR) was performed to analyse the relative mRNA expression in the patient samples. mRNA sequencing showed that 29 bases inserted into the 3'-end of exon 11 in the PKD1 gene lead to a frameshift mutation.

conclusionsThe PKD1 c.2854-3C > G mutation leads to a frameshift mutation during translation of the polycystin-1 protein, which eventually led to ADPKD in the Chinese family.

Indexed as

Frameshift MutationRNA SplicingAdultAsian PeopleBase SequenceFemaleHumansMaleMiddle AgedPedigreePolycystic Kidney, Autosomal DominantSequence Analysis, RNATRPP Cation ChannelsTRPP Cation ChannelsAutosomal dominant polycystic kidney diseaseFrameshift mutationNovel splice mutationPKD1 gene

Identifiers

PMID30424739
PMCPMC6234645
OpenAlexW2901066107

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.