Evidence map›Paper›PMID 30422124›Full record

ArticleScientific data2018

Small non-coding RNA expression in mouse nephrogenic mesenchymal progenitors.

Yu Leng Phua, Andrew Clugston, Kevin Hong Chen, Dennis Kostka, Jacqueline Ho

Abstract readDataset
In one paragraph

Article in Scientific data, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 5 papers.

0numbers the graph read from it
0cells of the map it votes in
5citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

5 citing papers in PubMed.

  1. Article
  2. Review
  3. Article
  4. Deletion of hypoxia-responsive microRNA-210 results in a sex-specific decrease in nephron number.FASEB journal : official publication of the Federation of American Societies for Experimental Biology · 2020
    Article
  5. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors.

Yu Leng PhuaRangos Research Center, Children's Hospital of Pittsburgh of UPMC, Pittsburgh, PA, USA.
Andrew ClugstonRangos Research Center, Children's Hospital of Pittsburgh of UPMC, Pittsburgh, PA, USA.
Kevin Hong ChenRangos Research Center, Children's Hospital of Pittsburgh of UPMC, Pittsburgh, PA, USA.
Dennis KostkaRangos Research Center, Children's Hospital of Pittsburgh of UPMC, Pittsburgh, PA, USA.
Jacqueline HoRangos Research Center, Children's Hospital of Pittsburgh of UPMC, Pittsburgh, PA, USA.

Funding

The Role of miR-17~92 in Nephron ProgenitorsR01DK103776 · NIDDK · UNIVERSITY OF PITTSBURGH AT PITTSBURGH · PI HO, JACQUELINE · 2014 to 2018
$1.7M
Modeling the Dynamics of Genome-Scale Data Across TreesR01GM115836 · NIGMS · UNIVERSITY OF PITTSBURGH AT PITTSBURGH · PI CAPRA, JOHN ANTHONY, KOSTKA, DENNIS · 2015 to 2017
$1.1M
MicroRNAs in Kidney Progenitor Cells.R00DK087922 · NIDDK · UNIVERSITY OF PITTSBURGH AT PITTSBURGH · PI HO, JACQUELINE · 2012 to 2014
$722k
NIDDK NIH HHS R00 DK087922NIDDK NIH HHS R01 DK103776NIGMS NIH HHS R01 GM115836
6 · The paper itself

Abstract

MicroRNAs (miRNAs) are small non-coding RNAs that are essential for the regulation of gene expression and play critical roles in human health and disease. Here we present comprehensive miRNA profiling data for mouse nephrogenic mesenchymal progenitors, a population of cells enriched for nephron progenitors that give rise to most cell-types of the nephron, the functional unit of the kidney. We describe a miRNA expression in nephrogenic mesenchymal progenitors, with 162 miRNAs differentially expressed in progenitors when compared to whole kidney. We also annotated 49 novel miRNAs in the developing kidney and experimentally validated 4 of them. Our data are available as a public resource, so that it can be integrated into future studies and analyzed in the context of other functional and epigenomic data in kidney development. Specifically, it will be useful in the effort to shed light on molecular mechanisms underlying processes essential for normal kidney development, like nephron progenitor specification, self-renewal and differentiation.

Indexed as

AnimalsGene Expression Regulation, DevelopmentalKidneyMesodermMiceNephronsRNA, Small UntranslatedRNA, Small Untranslated

Identifiers

PMID30422124
PMCPMC6233257

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.