ArticleScientific data2018
RNA-seq transcriptomic profiling of crassulacean acid metabolism pathway in Dendrobium catenatum.
Article in Scientific data, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 14 papers.
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Who cites it
14 citing papers in PubMed.
- Genome-wide identification and expression analysis of stress-associated proteins (SAPs) containing A20/AN1 Zinc finger in Dendrobium officinale.BMC plant biology · 2026Article
- UGT708S6 from Dendrobium catenatum, catalyzes the formation of flavonoid C-glycosides.BMC biotechnology · 2024Article
- Progress in systematics and biogeography of Orchidaceae.Plant diversity · 2024Review
- Auxin and carbohydrate control flower bud development in Anthurium andraeanum during early stage of sexual reproduction.BMC plant biology · 2024Article
- The CAM lineages of planet Earth.Annals of botany · 2023Article
- Genome-wide identification, characterization and transcriptional profile of the SWEET gene family in Dendrobium officinale.BMC genomics · 2023Article
- The climate changes promoted the chloroplast genomic evolution of Dendrobium orchids among multiple photosynthetic pathways.BMC plant biology · 2023Article
- Article
- Metabolic Profiling of Terpene Diversity and the Response of Prenylsynthase-Terpene Synthase Genes during Biotic and Abiotic Stresses inInternational journal of molecular sciences · 2022Article
- Genome-wide analysis ofFrontiers in plant science · 2022Article
- Identification and Expression Profiling of Nonphosphorus Glycerolipid Synthase Genes in Response to Abiotic Stresses inPlants (Basel, Switzerland) · 2021Article
- Genome-wide identification and analysis of DNA methyltransferase and demethylase gene families in Dendrobium officinale reveal their potential functions in polysaccharide accumulation.BMC plant biology · 2021Article
- Research Advances in Multi-Omics on the Traditional Chinese HerbFrontiers in plant science · 2021Review
- Genome-wide identification and expression profiling of SET DOMAIN GROUP family in Dendrobium catenatum.BMC plant biology · 2020Article
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Authors and funding
6 authors.
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Abstract
The regulation of crassulacean acid metabolism (CAM) pathway has recently become a topic of intensive research and has been explored in terms of several aspects, including phylogenetics, genomics, and transcriptomics. Orchidaceae, which contains approximately 9,000 CAM species, is one of the largest lineages using this special photosynthetic pathway. However, no comprehensive transcriptomic profiling focused on CAM regulation in orchid species had previously been performed. In this report, we present two Illumina RNA-seq datasets, including a total of 24 mature leaf samples with 844.4 million reads, from Dendrobium catenatum (Orchidaceae), a facultative CAM species. The first dataset was generated from a time-course experiment based on the typical CAM phases in a diel. The second was derived from an experiment on drought stress and stress removal. A series of quality assessments were conducted to verify the reliability of the datasets. These transcriptomic profiling datasets will be useful to explore and understand the essence of CAM regulation.
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