Evidence map›Paper›PMID 30422114›Full record

ArticleeLife2018

Translesion polymerase kappa-dependent DNA synthesis underlies replication fork recovery.

Peter Tonzi, Yandong Yin, Chelsea Wei Ting Lee, Eli Rothenberg, Tony T Huang

Open access · goldAbstract read
In one paragraph

Article in eLife, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 48 papers.

0numbers the graph read from it
0cells of the map it votes in
48citing papers in PubMed
4.0field-weighted citation impact, top 5% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

48 citing papers in PubMed, 71 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 1 institution in 1 country.

Peter TonziDepartment of Biochemistry & Molecular Pharmacology, New York University School of Medicine, New York, United States.
Yandong YinDepartment of Biochemistry & Molecular Pharmacology, New York University School of Medicine, New York, United States.ORCID http://orcid.org/0000-0003-2499-871X
Chelsea Wei Ting LeeDepartment of Biochemistry & Molecular Pharmacology, New York University School of Medicine, New York, United States.
Eli RothenbergDepartment of Biochemistry & Molecular Pharmacology, New York University School of Medicine, New York, United States.
Tony T HuangDepartment of Biochemistry & Molecular Pharmacology, New York University School of Medicine, New York, United States.ORCID http://orcid.org/0000-0001-9291-5002
National Cancer Institute · US

Funding

MEDICAL SCIENTIST TRAININGT32GM007308 · NIGMS · NEW YORK UNIVERSITY SCHOOL OF MEDICINE · PI PHILIPS, MARK REID · 1985 to 2019
$23.2M
Mechanisms of reversible DUB oxidation in genome stability pathways - RevisionR01ES025166 · NIEHS · NEW YORK UNIVERSITY SCHOOL OF MEDICINE · PI HUANG, TONY TUNG · 2015 to 2020
$2.3M
Single-Molecule Studies of Non-Homologous DNA End JoiningR01GM108119 · NIGMS · NEW YORK UNIVERSITY SCHOOL OF MEDICINE · PI ROTHENBERG, ELI · 2015 to 2019
$1.7M
Genome Integrity Training ProgramT32GM115313 · NIGMS · NEW YORK UNIVERSITY SCHOOL OF MEDICINE · PI SMITH, SUSAN · 2015 to 2019
$927k
NIEHS NIH HHS R01 ES025166NIGMS NIH HHS R01 GM108119NIGMS NIH HHS T32 GM007308NIGMS NIH HHS T32 GM115313NIH HHS ES025166NIH HHS GM108119NIH HHS T32GM115313
6 · The paper itself

Abstract

DNA replication stress is often defined by the slowing or stalling of replication fork progression leading to local or global DNA synthesis inhibition. Failure to resolve replication stress in a timely manner contribute toward cell cycle defects, genome instability and human disease; however, the mechanism for fork recovery remains poorly defined. Here, we show that the translesion DNA polymerase (Pol) kappa, a DinB orthologue, has a unique role in both protecting and restarting stalled replication forks under conditions of nucleotide deprivation. Importantly, Pol kappa-mediated DNA synthesis during hydroxyurea (HU)-dependent fork restart is regulated by both the Fanconi Anemia (FA) pathway and PCNA polyubiquitination. Loss of Pol kappa prevents timely rescue of stalled replication forks, leading to replication-associated genomic instability, and a p53-dependent cell cycle defect. Taken together, our results identify a previously unanticipated role for Pol kappa in promoting DNA synthesis and replication stress recovery at sites of stalled forks.

Indexed as

DNA ReplicationCell LineDNADNA-Directed DNA PolymeraseFanconi Anemia Complementation Group ProteinsHumansHydroxyureaProliferating Cell Nuclear AntigenY-Family DNA PolymerasesDNADNA-Directed DNA PolymeraseFanconi Anemia Complementation Group ProteinsHydroxyureaPCNA protein, humanPOLK protein, humanProliferating Cell Nuclear AntigenY-Family DNA Polymeraseschromosomesgene expressionhumanreplication stresstranslesion polymerasesubiquitin biology

Identifiers

PMID30422114
PMCPMC6251625
OpenAlexW2900867011

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.