Evidence map›Paper›PMID 30421572›Full record

ArticleEnvironmental microbiology2019

Gene cluster conservation identifies melanin and perylenequinone biosynthesis pathways in multiple plant pathogenic fungi.

Malaika K Ebert, Rebecca E Spanner, Ronnie de Jonge, David J Smith, Jason Holthusen, Gary A Secor, Bart P H J Thomma, Melvin D Bolton

Open access · hybridAbstract read
In one paragraph

Article in Environmental microbiology, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 13 papers.

0numbers the graph read from it
0cells of the map it votes in
13citing papers in PubMed
1.2field-weighted citation impact, top 24% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

13 citing papers in PubMed, 34 citations in OpenAlex.

  1. Article
  2. Induced effect of NaWorld journal of microbiology & biotechnology · 2025
    Article
  3. Article
  4. Regulation of melanin production in fungi.Frontiers in fungal biology · 2025
    Review
  5. Article
  6. Article
  7. Article
  8. Cercospora leaf spot disease of sugar beet.Plant signaling & behavior · 2023
    Review
  9. A putative terpene cyclase gene (Frontiers in microbiology · 2023
    Article
  10. Article
  11. An Unconventional Melanin Biosynthesis Pathway in Ustilago maydis.Applied and environmental microbiology · 2021
    Article
  12. Article
  13. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 4 institutions in 3 countries.

Malaika K EbertRed River Valley Agricultural Research Center, USDA Agricultural Research Service, Fargo, ND, USA.ORCID 0000-0002-1891-6063
Rebecca E SpannerRed River Valley Agricultural Research Center, USDA Agricultural Research Service, Fargo, ND, USA.ORCID 0000-0002-4735-9649
Ronnie de JongePlant-Microbe Interactions, Department of Biology, Science4Life, Utrecht University, Utrecht, The Netherlands.ORCID 0000-0001-5065-8538
David J SmithRed River Valley Agricultural Research Center, USDA Agricultural Research Service, Fargo, ND, USA.
Jason HolthusenRed River Valley Agricultural Research Center, USDA Agricultural Research Service, Fargo, ND, USA.
Gary A SecorDepartment of Plant Pathology, North Dakota State University, Fargo, ND, USA.
Bart P H J ThommaLaboratory of Phytopathology, Wageningen University, Wageningen, The Netherlands.ORCID 0000-0003-4125-4181
Melvin D BoltonRed River Valley Agricultural Research Center, USDA Agricultural Research Service, Fargo, ND, USA.ORCID 0000-0003-1197-2078
Agricultural Research Service · USNorth Dakota State University · USUtrecht University · NLWageningen University & Research · NL

Funding

Agricultural Research Service 3060-22000-049European Molecular Biology Organization ALTF 359-2013Fonds Wetenschappelijk Onderzoek 12B8116NNederlandse Organisatie voor Wetenschappelijk Onderzoek 833.13.007
6 · The paper itself

Abstract

Perylenequinones are a family of structurally related polyketide fungal toxins with nearly universal toxicity. These photosensitizing compounds absorb light energy which enables them to generate reactive oxygen species that damage host cells. This potent mechanism serves as an effective weapon for plant pathogens in disease or niche establishment. The sugar beet pathogen Cercospora beticola secretes the perylenequinone cercosporin during infection. We have shown recently that the cercosporin toxin biosynthesis (CTB) gene cluster is present in several other phytopathogenic fungi, prompting the search for biosynthetic gene clusters (BGCs) of structurally similar perylenequinones in other fungi. Here, we report the identification of the elsinochrome and phleichrome BGCs of Elsinoë fawcettii and Cladosporium phlei, respectively, based on gene cluster conservation with the CTB and hypocrellin BGCs. Furthermore, we show that previously reported BGCs for elsinochrome and phleichrome are involved in melanin production. Phylogenetic analysis of the corresponding melanin polyketide synthases (PKSs) and alignment of melanin BGCs revealed high conservation between the established and newly identified C. beticola, E. fawcettii and C. phlei melanin BGCs. Mutagenesis of the identified perylenequinone and melanin PKSs in C. beticola and E. fawcettii coupled with mass spectrometric metabolite analyses confirmed their roles in toxin and melanin production.

Indexed as

Genes, FungalMultigene FamilyAscomycotaBiosynthetic PathwaysCladosporiumMelaninsMycotoxinsPerylenePhylogenyPlantsPolyketide SynthasesQuinonescercosporinMelaninsMycotoxinsPeryleneperylenequinonePolyketide SynthasesQuinones

Identifiers

PMID30421572
PMCPMC7379194
OpenAlexW2884095757

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC-ND
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.