Evidence map›Paper›PMID 30420612›Full record

ArticleBritish journal of cancer2018

Bcl-2-dependent synthetic lethal interaction of the IDF-11774 with the V0 subunit C of vacuolar ATPase (ATP6V0C) in colorectal cancer.

Bo-Kyung Kim, Soon Woo Nam, Byung Soh Min, Hyun Seung Ban, Soonmyung Paik, Kyeong Lee, Joo-Young Im, Youngjoo Lee, Joon-Tae Park, Seon-Young Kim and 3 more

Open access · hybridAbstract read
In one paragraph

Article in British journal of cancer, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 15 papers.

0numbers the graph read from it
0cells of the map it votes in
15citing papers in PubMed
1.1field-weighted citation impact, top 22% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

15 citing papers in PubMed, 27 citations in OpenAlex.

  1. Review
  2. Article
  3. The V-ATPases in cancer and cell death.Cancer gene therapy · 2022
    Review
  4. Article
  5. Review
  6. Article
  7. Review
  8. Conditional Cell Reprogramming in Modeling Digestive System Diseases.Frontiers in cell and developmental biology · 2021
    Review
  9. Article
  10. Article
  11. Review
  12. Review
  13. Article
  14. Article
  15. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

13 authors at 5 institutions in 1 country.

Bo-Kyung KimPersonalized Genomic Medicine Research Center, KRIBB, Daejeon, 34141, Korea.
Soon Woo NamThe Catholic University of Korea, Incheon St Mary's Hospital, 56 Dongsuro Bupyunggu, Incheon, 06591, Korea.
Byung Soh MinServerance Biomedical Science Institute, Yonsei University College of Medicine, Seoul, 03722, Korea.
Hyun Seung BanMetabolic Regulation Research Center, KRIBB, Daejeon, 34141, Korea.
Soonmyung PaikServerance Biomedical Science Institute, Yonsei University College of Medicine, Seoul, 03722, Korea.
Kyeong LeeCollege of Pharmacy, Dongguk University-Seoul, Goyang, 410-820, Korea.
Joo-Young ImPersonalized Genomic Medicine Research Center, KRIBB, Daejeon, 34141, Korea.
Youngjoo LeePersonalized Genomic Medicine Research Center, KRIBB, Daejeon, 34141, Korea.
Joon-Tae ParkDrug Discovery Team, ILDONG Pharmaceutical Co. Ltd., Hwaseong, Hwaseong, 445-811, Korea.
Seon-Young KimPersonalized Genomic Medicine Research Center, KRIBB, Daejeon, 34141, Korea.
Mirang KimPersonalized Genomic Medicine Research Center, KRIBB, Daejeon, 34141, Korea.
Hongsub LeeDrug Discovery Team, ILDONG Pharmaceutical Co. Ltd., Hwaseong, Hwaseong, 445-811, Korea.
Misun WonPersonalized Genomic Medicine Research Center, KRIBB, Daejeon, 34141, Korea. misun@kribb.re.kr.
Korea Research Institute of Bioscience and Biotechnology · KRKyungdong Pharmaceutical (South Korea) · KRYonsei University · KRDongguk University · KRIncheon St. Mary's Hospital · KR

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

backgroundThe IDF-11774, a novel clinical candidate for cancer therapy, targets HSP70 and inhibits mitochondrial respiration, resulting in the activation of AMPK and reduction in HIF-1α accumulation.

methodsTo identify genes that have synthetic lethality to IDF-11774, RNA interference screening was conducted, using pooled lentiviruses expressing a short hairpin RNA library.

resultsWe identified ATP6V0C, encoding the V0 subunit C of lysosomal V-ATPase, knockdown of which induced a synergistic growth-inhibitory effect in HCT116 cells in the presence of IDF-11774. The synthetic lethality of IDF-11774 with ATP6V0C possibly correlates with IDF-11774-mediated autolysosome formation. Notably, the synergistic effect of IDF-11774 and the ATP6V0C inhibitor, bafilomycin A1, depended on the PIK3CA genetic status and Bcl-2 expression, which regulates autolysosome formation and apoptosis. Similarly, in an experiment using conditionally reprogramed cells derived from colorectal cancer patients, synergistic growth inhibition was observed in cells with low Bcl-2 expression.

conclusionsBcl-2 is a biomarker for the synthetic lethal interaction of IDF-11774 with ATP6V0C, which is clinically applicable for the treatment of cancer patients with IDF-11774 or autophagy-inducing anti-cancer drugs.

Indexed as

AdamantaneAnimalsApoptosisAutophagyCell Line, TumorClass I Phosphatidylinositol 3-KinasesColorectal NeoplasmsFemaleHumansHypoxia-Inducible Factor 1, alpha SubunitMacrolidesMicePiperazinesProto-Oncogene Proteins c-bcl-2Vacuolar Proton-Translocating ATPasesXenograft Model Antitumor AssaysAdamantanebafilomycin A1BCL2 protein, humanClass I Phosphatidylinositol 3-KinasesHypoxia-Inducible Factor 1, alpha SubunitIDF-11774MacrolidesPIK3CA protein, humanPiperazinesProto-Oncogene Proteins c-bcl-2Vacuolar Proton-Translocating ATPases

Identifiers

PMID30420612
PMCPMC6265273
OpenAlexW2900336704

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.