Evidence map›Paper›PMID 30420609›Full record

ArticleNature communications2018

High-throughput three-dimensional chemotactic assays reveal steepness-dependent complexity in neuronal sensation to molecular gradients.

Zhen Xu, Peilin Fang, Bingzhe Xu, Yufeng Lu, Jinghui Xiong, Feng Gao, Xin Wang, Jun Fan, Peng Shi

Open access · goldAbstract read
In one paragraph

Article in Nature communications, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 9 papers.

0numbers the graph read from it
0cells of the map it votes in
9citing papers in PubMed
2.1field-weighted citation impact, top 13% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

9 citing papers in PubMed, 40 citations in OpenAlex.

  1. Article
  2. Review
  3. Article
  4. Article
  5. Review
  6. Article
  7. Article
  8. Review
  9. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 1 institution in 2 countries.

Zhen XuDepartment of Biomedical Engineering, City University of Hong Kong, 83 Tat Chee Ave, Kowloon, Hong Kong SAR, 999077, China.
Peilin FangDepartment of Biomedical Engineering, City University of Hong Kong, 83 Tat Chee Ave, Kowloon, Hong Kong SAR, 999077, China.
Bingzhe XuDepartment of Biomedical Engineering, City University of Hong Kong, 83 Tat Chee Ave, Kowloon, Hong Kong SAR, 999077, China.
Yufeng LuDepartment of Material Science and Engineering, City University of Hong Kong, 83 Tat Chee Ave, Kowloon, Hong Kong SAR, 999077, China.
Jinghui XiongDepartment of Material Science and Engineering, City University of Hong Kong, 83 Tat Chee Ave, Kowloon, Hong Kong SAR, 999077, China.
Feng GaoDepartment of Biomedical Science, City University of Hong Kong, 83 Tat Chee Ave, Kowloon, Hong Kong SAR, China.
Xin WangDepartment of Biomedical Science, City University of Hong Kong, 83 Tat Chee Ave, Kowloon, Hong Kong SAR, China.ORCID http://orcid.org/0000-0002-5122-2418
Jun FanDepartment of Material Science and Engineering, City University of Hong Kong, 83 Tat Chee Ave, Kowloon, Hong Kong SAR, 999077, China.
Peng ShiDepartment of Biomedical Engineering, City University of Hong Kong, 83 Tat Chee Ave, Kowloon, Hong Kong SAR, 999077, China. pengshi@cityu.edu.hk.
City University of Hong Kong · HK

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Many cellular programs of neural development are under combinatorial regulation by different chemoattractive or chemorepulsive factors. Here, we describe a microfluidic platform that utilizes well-controlled three-dimensional (3D) diffusion to generate molecular gradients of varied steepness in a large array of hydrogel cylinders, allowing high-throughput 3D chemotactic assays for mechanistic dissection of steepness-dependent neuronal chemotaxis. Using this platform, we examine neuronal sensitivity to the steepness of gradient composed of netrin-1, nerve growth factor, or semaphorin3A (Sema3A) proteins, and reveal dramatic diversity and complexity in the associated chemotactic regulation of neuronal development. Particularly for Sema3A, we find that serine/threonine kinase-11 and glycogen synthase kinase-3 signaling pathways are differentially involved in steepness-dependent chemotactic regulation of coordinated neurite repellence and neuronal migration. These results provide insights to the critical role of gradient steepness in neuronal chemotaxis, and also prove the technique as an expandable platform for studying other chemoresponsive cellular systems.

Indexed as

ChemotaxisAMP-Activated Protein Kinase KinasesAnimalsGlycogen Synthase Kinase 3High-Throughput Screening AssaysLab-On-A-Chip DevicesNerve Growth FactorNetrin-1NeuronsProtein Serine-Threonine KinasesRats, Sprague-DawleySemaphorin-3AAMP-Activated Protein Kinase KinasesGlycogen Synthase Kinase 3Nerve Growth FactorNetrin-1Protein Serine-Threonine KinasesSemaphorin-3AStk11 protein, rat

Identifiers

PMID30420609
PMCPMC6232128
OpenAlexW2899681174

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.