Evidence map›Paper›PMID 30420297›Full record

Trial reportEBioMedicine2018

Natural Variations in BRLF1 Promoter Contribute to the Elevated Reactivation Level of Epstein-Barr Virus in Endemic Areas of Nasopharyngeal Carcinoma.

Jiang-Bo Zhang, Shao-Yi Huang, Tong-Min Wang, Si-Qi Dong, Yong-Qiao He, Xiao-Hui Zheng, Xi-Zhao Li, Fang Wang, Mu Jianbing, Wei-Hua Jia

Open access · goldAbstract readClinical Trial
In one paragraph

Trial report in EBioMedicine, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 8 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
8citing papers in PubMed, 1 pooled it
1.3field-weighted citation impact, top 16% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

8 citing papers in PubMed, 1 synthesis or guideline pooled it, 20 citations in OpenAlex.

  1. Pooled it
  2. Chromatin Control of EBV Infection and Latency.Current topics in microbiology and immunology · 2025
    Article
  3. Review
  4. Article
  5. Article
  6. Article
  7. Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors at 4 institutions in 2 countries.

Jiang-Bo ZhangState Key Laboratory of Oncology in South China; Collaborative Innovation Center for Cancer Medicine, Key Laboratory of Nasopharyngeal Carcinoma Diagnosis and Therapy; Sun Yat-sen University Cancer Center, 651 Dongfengdong Road, Guangzhou, Guangdong 510060, China.
Shao-Yi HuangState Key Laboratory of Oncology in South China; Collaborative Innovation Center for Cancer Medicine, Key Laboratory of Nasopharyngeal Carcinoma Diagnosis and Therapy; Sun Yat-sen University Cancer Center, 651 Dongfengdong Road, Guangzhou, Guangdong 510060, China; Chongqing cancer hospital, Chongqing, China.
Tong-Min WangState Key Laboratory of Oncology in South China; Collaborative Innovation Center for Cancer Medicine, Key Laboratory of Nasopharyngeal Carcinoma Diagnosis and Therapy; Sun Yat-sen University Cancer Center, 651 Dongfengdong Road, Guangzhou, Guangdong 510060, China.
Si-Qi DongState Key Laboratory of Oncology in South China; Collaborative Innovation Center for Cancer Medicine, Key Laboratory of Nasopharyngeal Carcinoma Diagnosis and Therapy; Sun Yat-sen University Cancer Center, 651 Dongfengdong Road, Guangzhou, Guangdong 510060, China.
Yong-Qiao HeState Key Laboratory of Oncology in South China; Collaborative Innovation Center for Cancer Medicine, Key Laboratory of Nasopharyngeal Carcinoma Diagnosis and Therapy; Sun Yat-sen University Cancer Center, 651 Dongfengdong Road, Guangzhou, Guangdong 510060, China.
Xiao-Hui ZhengState Key Laboratory of Oncology in South China; Collaborative Innovation Center for Cancer Medicine, Key Laboratory of Nasopharyngeal Carcinoma Diagnosis and Therapy; Sun Yat-sen University Cancer Center, 651 Dongfengdong Road, Guangzhou, Guangdong 510060, China; Affiliated Tumor Hospital of Xinjiang Medical University, Urumqi, Xinjiang 830000, China.
Xi-Zhao LiState Key Laboratory of Oncology in South China; Collaborative Innovation Center for Cancer Medicine, Key Laboratory of Nasopharyngeal Carcinoma Diagnosis and Therapy; Sun Yat-sen University Cancer Center, 651 Dongfengdong Road, Guangzhou, Guangdong 510060, China.
Fang WangState Key Laboratory of Oncology in South China; Collaborative Innovation Center for Cancer Medicine, Key Laboratory of Nasopharyngeal Carcinoma Diagnosis and Therapy; Sun Yat-sen University Cancer Center, 651 Dongfengdong Road, Guangzhou, Guangdong 510060, China.
Mu JianbingLaboratory of Malaria and Vector Research, National Institute of Allergy and Infectious Diseases, Rockville, MD, USA.
Wei-Hua JiaState Key Laboratory of Oncology in South China; Collaborative Innovation Center for Cancer Medicine, Key Laboratory of Nasopharyngeal Carcinoma Diagnosis and Therapy; Sun Yat-sen University Cancer Center, 651 Dongfengdong Road, Guangzhou, Guangdong 510060, China; Cancer Center of Guangzhou Medical University, Guangzhou, China; School of Public Health, Sun Yat-Sen University, Guangzhou, China. Electronic address: jiawh@sysucc.org.cn.
State Key Laboratory of Oncology in South ChinaSun Yat-sen University · CNSun Yat-sen University Cancer Center · CNVector (United States) · US

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

backgroundEpstein-Barr virus (EBV) infection is a crucial risk factor for nasopharyngeal carcinoma (NPC), but the mechanism for its elevated activation level in NPC endemic areas remains unclear. This study aims to identify the EBV natural variations contributed to the different reactivation potential between NPC endemic and non-endemic areas.

methods1030 subjects were recruited in China, including 303 healthy individuals from two NPC non-endemic areas, 483 healthy people from three endemic areas and 244 NPC patients. Among which, saliva DNA samples from 244 participants were sequenced for the EBV immediate early (IE) genes of BRLF1 and BZLF1, their promoters were included; the rest 786 subjects were used for the validation of significant variations among three different populations. Haplotype and population structure analysis were conducted. Dual-luciferase assay was used to detect the promoter activity.

resultsA total of 246 distinct variations were detected, 29 showed significant difference in the frequencies between healthy people from NPC endemic area and non-endemic area. Population structure analysis clustered EBV strains into 9 subgroups mostly in accordance with the geographical origin of samples. Interestingly, two EBV genotypes, Rp-V1 and Rp-V2, were identified according to the linkage relationship of the variations in BRLF1 promoter (Rp). Rp-V1 has higher frequency in NPC endemic areas than in non-endemic areas (52.38% vs 18.15%, P = 2.07 × 10

conclusionsThis study identified natural variations in cis-acting elements (YY1 and EBF1) of EBV Rp altering Rp transcription activities, which may contribute to the elevated EBV activation level in NPC endemic areas than non-endemic areas.

Indexed as

Genetic VariationPromoter Regions, GeneticChinaEpstein-Barr Virus InfectionsFemaleHerpesvirus 4, HumanHumansImmediate-Early ProteinsMaleNasopharyngeal CarcinomaNasopharyngeal NeoplasmsTrans-ActivatorsBRLF1 protein, Human herpesvirus 4Immediate-Early ProteinsTrans-ActivatorsBRLF1BZLF1Epstein-Barr virusNasopharyngeal carcinomaReactivationVariation

Identifiers

PMID30420297
PMCPMC6286269
OpenAlexW2900395978

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC-ND
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.