Evidence map›Paper›PMID 30419335›Full record

ArticleMethods (San Diego, Calif.)2019

Fluorescence-based quantification of nucleocytoplasmic transport.

Joshua B Kelley, Bryce M Paschal

Abstract read
In one paragraph

Article in Methods (San Diego, Calif.), 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 60 papers.

0numbers the graph read from it
0cells of the map it votes in
60citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

60 citing papers in PubMed.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

2 authors.

Joshua B KelleyDepartment of Molecular and Biomedical Sciences, University of Maine, United States. Electronic address: joshua.b.kelley@maine.edu.
Bryce M PaschalCenter for Cell Signaling, Department of Biochemistry and Molecular Genetics, University of Virginia, United States.

Funding

Parp Function in Prostate CancerR01CA214872 · NCI · UNIVERSITY OF VIRGINIA · PI Bryce Paschal · 2017 to 2026
$3.6M
The role of G alpha signaling in gradient trackingR15GM128026 · NIGMS · UNIVERSITY OF MAINE ORONO · PI KELLEY, JOSHUA BRIAN, KHALIL, ANDRE · 2018 to 2018
$424k
NCI NIH HHS R01 CA214872NIGMS NIH HHS R15 GM128026
6 · The paper itself

Abstract

The sequestration of DNA within the membrane-bound nucleus is a defining characteristic of eukaryotic cells. Replication and transcription are therefore restricted to the nucleus, however, the regulation of these events relies on cytoplasmic processes including protein synthesis and signal transduction pathways. Because a variety of cellular activities depend on nuclear transport, researchers from diverse fields have found it useful to examine the nuclear localization of proteins of interest. Here we present some important technical considerations for studying nuclear and cytoplasmic localization, and provide guidance for quantifying protein levels using fluorescence microscopy and ImageJ software. We include discussion of the use of regions of interest and image segmentation for quantification of protein localization. Nucleocytoplasmic transport is fundamentally important for controlling protein levels and activity in the nucleus or cytoplasm, and quantitative analysis can provide insight into how biological output is achieved.

Indexed as

Active Transport, Cell NucleusCell NucleusCytoplasmFluorescenceHumansMicroscopy, FluorescenceProtein TransportSignal Transduction

Identifiers

PMID30419335
PMCPMC7041306

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.