Evidence map›Paper›PMID 30418590›Full record

ArticleNucleic acids research2019

BREX system of Escherichia coli distinguishes self from non-self by methylation of a specific DNA site.

Julia Gordeeva, Natalya Morozova, Nicolas Sierro, Artem Isaev, Tomas Sinkunas, Ksenia Tsvetkova, Mikhail Matlashov, Lidija Truncaite, Richard D Morgan, Nikolai V Ivanov and 3 more

Abstract read
In one paragraph

Article in Nucleic acids research, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 69 papers.

0numbers the graph read from it
0cells of the map it votes in
69citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

69 citing papers in PubMed.

  1. Article
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  12. Modified DNA substrate selectivity by GmrSD-family Type IV restriction enzyme BrxU.Philosophical transactions of the Royal Society of London. Series B, Biological sciences · 2025
    Article
  13. Article
  14. Article
  15. Article
  16. D-CAPS: an efficient CRISPR-Cas9-based phage defense system forActa biochimica et biophysica Sinica · 2025
    Article
  17. Review
  18. Article
  19. Review
  20. Overview of Phage Defense Systems in Bacteria and Their Applications.International journal of molecular sciences · 2024
    Review

9 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

13 authors.

Julia GordeevaSkolkovo Institute of Science and Technology, Moscow 143028, Russia.
Natalya MorozovaSkolkovo Institute of Science and Technology, Moscow 143028, Russia.
Nicolas SierroPhilip Morris International R&D, Philip Morris Products S.A., Neuchâtel 2000, Switzerland.
Artem IsaevSkolkovo Institute of Science and Technology, Moscow 143028, Russia.
Tomas SinkunasInstitute of Biotechnology, Vilnius University, Sauletekio Avenue 7, Vilnius 10257, Lithuania.
Ksenia TsvetkovaSkolkovo Institute of Science and Technology, Moscow 143028, Russia.
Mikhail MatlashovSkolkovo Institute of Science and Technology, Moscow 143028, Russia.
Lidija TruncaiteInstitute of Biochemistry, Vilnius University, Sauletekio Avenue 7, Vilnius 10257, Lithuania.
Richard D MorganNew England Biolabs, 240 County Road, Ipswich, MA 01938, USA.
Nikolai V IvanovPhilip Morris International R&D, Philip Morris Products S.A., Neuchâtel 2000, Switzerland.
Virgis SiksnysInstitute of Biotechnology, Vilnius University, Sauletekio Avenue 7, Vilnius 10257, Lithuania.
Lanying ZengDepartment of Biochemistry and Biophysics, Center for Phage Technology, Texas A&M University, College Station, TX 77843, USA.
Konstantin SeverinovSkolkovo Institute of Science and Technology, Moscow 143028, Russia.

Funding

Integration of Diverse Inputs Determines Developmental OutcomesR01GM107597 · NIGMS · TEXAS A&M AGRILIFE RESEARCH · PI BALAZSI, GABOR, ZENG, LANYING · 2015 to 2018
$1.7M
NIGMS NIH HHS R01 GM107597
6 · The paper itself

Abstract

Prokaryotes evolved numerous systems that defend against predation by bacteriophages. In addition to well-known restriction-modification and CRISPR-Cas immunity systems, many poorly characterized systems exist. One class of such systems, named BREX, consists of a putative phosphatase, a methyltransferase and four other proteins. A Bacillus cereus BREX system provides resistance to several unrelated phages and leads to modification of specific motif in host DNA. Here, we study the action of BREX system from a natural Escherichia coli isolate. We show that while it makes cells resistant to phage λ infection, induction of λ prophage from cells carrying BREX leads to production of viruses that overcome the defense. The induced phage DNA contains a methylated adenine residue in a specific motif. The same modification is found in the genome of BREX-carrying cells. The results establish, for the first time, that immunity to BREX system defense is provided by an epigenetic modification.

Indexed as

AdenineBacillus cereusBacteriophage lambdaCRISPR-Cas SystemsDNA MethylationEscherichia coliMethyltransferasesNucleotide MotifsPhosphoric Monoester HydrolasesAdenineMethyltransferasesPhosphoric Monoester Hydrolases

Identifiers

PMID30418590
PMCPMC6326788

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.