Evidence map›Paper›PMID 30417107›Full record

ArticlemSystems

Loss of Bacitracin Resistance Due to a Large Genomic Deletion among

Yoshikazu Furuta, Hayato Harima, Emiko Ito, Fumito Maruyama, Naomi Ohnishi, Ken Osaki, Hirohito Ogawa, David Squarre, Bernard Mudenda Hang'ombe, Hideaki Higashi

Abstract read
In one paragraph

Article in mSystems. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 4 papers.

0numbers the graph read from it
0cells of the map it votes in
4citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

4 citing papers in PubMed.

  1. Silkworm model forVirulence · 2021
    Article
  2. Article
  3. Article
  4. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors.

Yoshikazu FurutaDivision of Infection and Immunity, Research Center for Zoonosis Control, Hokkaido University, Sapporo, Japan.ORCID https://orcid.org/0000-0003-4710-1389
Hayato HarimaHokudai Center for Zoonosis Control in Zambia, Research Center for Zoonosis Control, Hokkaido University, Sapporo, Japan.
Emiko ItoDivision of Infection and Immunity, Research Center for Zoonosis Control, Hokkaido University, Sapporo, Japan.
Fumito MaruyamaDepartment of Microbiology, Graduate School of Medicine, Kyoto University, Kyoto, Japan.ORCID https://orcid.org/0000-0003-2347-616X
Naomi OhnishiDivision of Infection and Immunity, Research Center for Zoonosis Control, Hokkaido University, Sapporo, Japan.
Ken OsakiTOMY Digital Biology Co., Ltd., Tokyo, Japan.
Hirohito OgawaHokudai Center for Zoonosis Control in Zambia, Research Center for Zoonosis Control, Hokkaido University, Sapporo, Japan.
David SquarreDepartment of National Parks and Wildlife, Chilanga, Zambia.
Bernard Mudenda Hang'ombeDepartment of Para-clinical Studies, School of Veterinary Medicine, University of Zambia, Lusaka, Zambia.
Hideaki HigashiDivision of Infection and Immunity, Research Center for Zoonosis Control, Hokkaido University, Sapporo, Japan.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Bacillus anthracis is a Gram-positive endospore-forming bacterial species that causes anthrax in both humans and animals. In Zambia, anthrax cases are frequently reported in both livestock and wildlife, with occasional transmission to humans, causing serious public health problems in the country. To understand the genetic diversity of B. anthracis strains in Zambia, we sequenced and compared the genomic DNA of B. anthracis strains isolated across the country. Single nucleotide polymorphisms clustered these strains into three groups. Genome sequence comparisons revealed a large deletion in strains belonging to one of the groups, possibly due to unequal crossing over between a pair of rRNA operons. The deleted genomic region included genes conferring resistance to bacitracin, and the strains with the deletion were confirmed with loss of bacitracin resistance. Similar deletions between rRNA operons were also observed in a few B. anthracis strains phylogenetically distant from Zambian strains. The structure of bacitracin resistance genes flanked by rRNA operons was conserved only in members of the Bacillus cereus group. The diversity and genomic characteristics of B. anthracis strains determined in this study would help in the development of genetic markers and treatment of anthrax in Zambia.

Indexed as

antibiotic resistanceBacillus anthracisBacillus cereus groupbacitracingenome analysisrRNA operonunequal crossing over

Identifiers

PMID30417107
PMCPMC6208641

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.