Evidence map›Paper›PMID 30417096›Full record

ArticleScience advances2018

The genetic prehistory of the Andean highlands 7000 years BP though European contact.

John Lindo, Randall Haas, Courtney Hofman, Mario Apata, Mauricio Moraga, Ricardo A Verdugo, James T Watson, Carlos Viviano Llave, David Witonsky, Cynthia Beall and 4 more

Open access · goldAbstract read
In one paragraph

Article in Science advances, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 72 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
72citing papers in PubMed, 1 pooled it
13.6field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

72 citing papers in PubMed, 1 synthesis or guideline pooled it, 160 citations in OpenAlex.

  1. Pooled it
  2. Article
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  4. Review
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  7. Review
  8. Global patterns of natural selection inferred using ancient DNA.bioRxiv : the preprint server for biology · 2026
    Article
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  11. Dysregulated Fatty Acid Metabolism in Preeclampsia Among Highland Andeans: Insights Into Adaptive and Maladaptive Placental Metabolic Phenotypes.FASEB journal : official publication of the Federation of American Societies for Experimental Biology · 2025
    Article
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  15. Family relations of Moche elite burials on the North Coast of Peru (~500 CE): Analyses of the Señora de Cao and relatives.Proceedings of the National Academy of Sciences of the United States of America · 2025
    Article
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12 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

14 authors at 11 institutions in 4 countries.

John LindoDepartment of Anthropology, Emory University, Atlanta, GA 30322, USA.ORCID 0000-0002-2533-8505
Randall HaasDepartment of Anthropology, University of California, Davis, CA 95616, USA.ORCID 0000-0002-7742-2127
Courtney HofmanDepartment of Anthropology, University of Oklahoma, Norman, OK 73019, USA.ORCID 0000-0002-6808-3370
Mario ApataPrograma de Genética Humana, ICBM, Universidad de Chile, Santiago, Chile.
Mauricio MoragaPrograma de Genética Humana, ICBM, Universidad de Chile, Santiago, Chile.ORCID 0000-0002-8217-9950
Ricardo A VerdugoPrograma de Genética Humana, ICBM, Universidad de Chile, Santiago, Chile.ORCID 0000-0001-5668-5449
James T WatsonArizona State Museum and School of Anthropology, University of Arizona, Tucson, AZ 85721, USA.
Carlos Viviano LlavePeruvian Register of Professional Archaeologists, Peru.ORCID 0000-0003-2370-8063
David WitonskyDepartment of Human Genetics, University of Chicago, Chicago, IL 60637, USA.
Cynthia BeallDepartment of Anthropology, Case Western University, Cleveland, OH 44106, USA.
Christina WarinnerDepartment of Anthropology, University of Oklahoma, Norman, OK 73019, USA.ORCID 0000-0002-4528-5877
John NovembreDepartment of Human Genetics, University of Chicago, Chicago, IL 60637, USA.ORCID 0000-0001-5345-0214
Mark AldenderferSchool of Social Sciences, Humanities, and Arts, University of California, Merced, Merced, CA 95343, USA.ORCID 0000-0002-7033-4319
Anna Di RienzoDepartment of Human Genetics, University of Chicago, Chicago, IL 60637, USA.
University of Chicago · USUniversity of Chile · CLCase Western Reserve University · USClínica MEDS (Chile) · CLEmory University · USInstitute of Peruvian Studies · PEMax Planck Institute for the Science of Human History · DEUniversity of Arizona · USUniversity of California, Davis · USUniversity of California, Merced · USUniversity of Oklahoma · US

Funding

Genetic adaptations to high altitudeR01HL119577 · NHLBI · UNIVERSITY OF CHICAGO · PI DI RIENZO, ANNA · 2014 to 2023
$4.9M
NHLBI NIH HHS R01 HL119577
6 · The paper itself

Abstract

The peopling of the Andean highlands above 2500 m in elevation was a complex process that included cultural, biological, and genetic adaptations. Here, we present a time series of ancient whole genomes from the Andes of Peru, dating back to 7000 calendar years before the present (BP), and compare them to 42 new genome-wide genetic variation datasets from both highland and lowland populations. We infer three significant features: a split between low- and high-elevation populations that occurred between 9200 and 8200 BP; a population collapse after European contact that is significantly more severe in South American lowlanders than in highland populations; and evidence for positive selection at genetic loci related to starch digestion and plausibly pathogen resistance after European contact. We do not find selective sweep signals related to known components of the human hypoxia response, which may suggest more complex modes of genetic adaptation to high altitude.

Indexed as

Genetics, PopulationGenome, HumanPolymorphism, Single NucleotideAdaptation, PhysiologicalDNA, AncientGenotypeHumansHypoxiaIndians, South AmericanPopulation DynamicsSequence Analysis, DNAWhole Genome SequencingDNA, Ancient

Identifiers

PMID30417096
PMCPMC6224175
OpenAlexW2886462574

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.