Evidence map›Paper›PMID 30416368›Full record

ArticleMolecular breeding : new strategies in plant improvement2018

Development of species diagnostic SNP markers for quality control genotyping in four rice (

Marie Noelle Ndjiondjop, Kassa Semagn, Jianwei Zhang, Arnaud Comlan Gouda, Sèdjro Bienvenu Kpeki, Alphonse Goungoulou, Peterson Wambugu, Khady Nani Dramé, Isaac Kofi Bimpong, Dule Zhao

Open access · hybridAbstract read
In one paragraph

Article in Molecular breeding : new strategies in plant improvement, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 14 papers.

0numbers the graph read from it
0cells of the map it votes in
14citing papers in PubMed
2.7field-weighted citation impact, top 9% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

14 citing papers in PubMed, 30 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors at 4 institutions in 4 countries.

Marie Noelle NdjiondjopM'bé Research Station, Africa Rice Center (AfricaRice), 01 B.P. 2551, Bouaké, 01 Côte d'Ivoire.
Kassa SemagnM'bé Research Station, Africa Rice Center (AfricaRice), 01 B.P. 2551, Bouaké, 01 Côte d'Ivoire.ORCID 0000-0001-6486-5685
Jianwei Zhang3Arizona Genomics Institute and The School of Plant Sciences, University of Arizona, Thomas W. Keating Bioresearch Bldg., 1657 E. Helen Street, Tucson, AZ 85721 USA.
Arnaud Comlan GoudaM'bé Research Station, Africa Rice Center (AfricaRice), 01 B.P. 2551, Bouaké, 01 Côte d'Ivoire.
Sèdjro Bienvenu KpekiM'bé Research Station, Africa Rice Center (AfricaRice), 01 B.P. 2551, Bouaké, 01 Côte d'Ivoire.
Alphonse GoungoulouM'bé Research Station, Africa Rice Center (AfricaRice), 01 B.P. 2551, Bouaké, 01 Côte d'Ivoire.
Peterson WambuguKenya Agricultural and Livestock Research Organization (KALRO), Genetic Resources Research Institute, Nairobi, Kenya.
Khady Nani DraméAfricaRice Headquarters, 01 BP 4029, Abidjan, 01 Côte d'Ivoire.
Isaac Kofi BimpongM'bé Research Station, Africa Rice Center (AfricaRice), 01 B.P. 2551, Bouaké, 01 Côte d'Ivoire.
Dule ZhaoM'bé Research Station, Africa Rice Center (AfricaRice), 01 B.P. 2551, Bouaké, 01 Côte d'Ivoire.
Africa Rice Center · CIKenya Agricultural and Livestock Research Organization · KEUniversity of Alberta · CAUniversity of Arizona · US

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Species misclassification (misidentification) and handling errors have been frequently reported in various plant species conserved at diverse gene banks, which could restrict use of germplasm for correct purpose. The objectives of the present study were to (i) determine the extent of genotyping error (reproducibility) on DArTseq-based single-nucleotide polymorphisms (SNPs); (ii) determine the proportion of misclassified accessions across 3134 samples representing three African rice species complex (

Indexed as

African riceAsian riceCultivated riceDArTseqGenotyping by sequencingWild rice

Identifiers

PMID30416368
PMCPMC6208651
OpenAlexW2898087623

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.