Evidence map›Paper›PMID 30414067›Full record

ArticleJournal of the American Society for Mass Spectrometry2019

Free Radical-Initiated Peptide Sequencing Mass Spectrometry for Phosphopeptide Post-translational Modification Analysis.

Inae Jang, Aeran Jeon, Suk Gyu Lim, Duk Ki Hong, Min Soo Kim, Jae Hyeong Jo, Sang Tak Lee, Bongjin Moon, Han Bin Oh

Abstract readComparative Study
PubMed Publisher
In one paragraph

Article in Journal of the American Society for Mass Spectrometry, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 5 papers.

0numbers the graph read from it
0cells of the map it votes in
5citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

5 citing papers in PubMed.

  1. Analytical applications of gas-phase ion chemistry enabled by mass spectrometry.Analytical methods : advancing methods and applications · 2026
    Review
  2. Ion Mobility-Assisted Free Radical-Initiated Peptide Sequencing.International journal of mass spectrometry · 2025
    Article
  3. Improved Performance of Positive-Ion Mode Free Radical-Initiated Peptide Sequencing withJournal of the American Society for Mass Spectrometry · 2023
    Article
  4. Free Radical-Based Sequencing for Native Top-Down Mass Spectrometry.Journal of the American Society for Mass Spectrometry · 2022
    Article
  5. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors.

Inae JangDepartment of Chemistry, Sogang University, Seoul, 04107, Republic of Korea.
Aeran JeonDepartment of Chemistry, Sogang University, Seoul, 04107, Republic of Korea.
Suk Gyu LimSeoul Science High School, Seoul, 03066, Republic of Korea.
Duk Ki HongSeoul Science High School, Seoul, 03066, Republic of Korea.
Min Soo KimSeoul Science High School, Seoul, 03066, Republic of Korea.
Jae Hyeong JoSeoul Science High School, Seoul, 03066, Republic of Korea.
Sang Tak LeeDepartment of Chemistry, Sogang University, Seoul, 04107, Republic of Korea.
Bongjin MoonDepartment of Chemistry, Sogang University, Seoul, 04107, Republic of Korea.
Han Bin OhDepartment of Chemistry, Sogang University, Seoul, 04107, Republic of Korea. hanbinoh@sogang.ac.kr.ORCID http://orcid.org/0000-0001-7919-0393

Funding

National Research Foundation of Korea NRF-2015R1D1A1A01056782 and 2018R1A6A1A03024940
6 · The paper itself

Abstract

Free radical-initiated peptide sequencing mass spectrometry (FRIPS MS) was employed to analyze a number of representative singly or doubly protonated phosphopeptides (phosphoserine and phosphotyrosine peptides) in positive ion mode. In contrast to collision-activated dissociation (CAD) results, a loss of a phosphate group occurred to a limited degree for both phosphoserine and phosphotyrosine peptides, and thus, localization of a phosphorylated site was readily achieved. Considering that FRIPS MS supplies a substantial amount of collisional energy to peptides, this result was quite unexpected because a labile phosphate group was conserved. Analysis of the resulting peptide fragments revealed the extensive production of a-, c-, x-, and z-type fragments (with some minor b- and y-type fragments), suggesting that radical-driven peptide fragmentation was the primary mechanism involved in the FRIPS MS of phosphopeptides. Results of this study clearly indicate that FRIPS MS is a promising tool for the characterization of post-translational modifications such as phosphorylation. Graphical Abstract.

Indexed as

Cyclic N-OxidesFree RadicalsMass SpectrometryPeptide FragmentsPhosphopeptidesPhosphoserinePhosphotyrosineProtein Processing, Post-TranslationalProtonsCyclic N-OxidesFree RadicalsPeptide FragmentsPhosphopeptidesPhosphoserinePhosphotyrosineProtonsTEMPOFree radical–initiated peptide sequencing (FRIPS)PhosphopeptidesPhosphorylationPost-translational modifications (PTMs)Radical-driven tandem mass spectrometry

Identifiers

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.