Evidence map›Paper›PMID 30413778›Full record

ArticleScientific reports2018

The Hsp70 Gene Family in Solanum tuberosum: Genome-Wide Identification, Phylogeny, and Expression Patterns.

Jia Liu, Xin Pang, Yuan Cheng, Yuhe Yin, Qiang Zhang, Wenbin Su, Bing Hu, Qinwei Guo, Si Ha, Jianping Zhang and 1 more

Open access · goldAbstract read
In one paragraph

Article in Scientific reports, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 46 papers.

0numbers the graph read from it
0cells of the map it votes in
46citing papers in PubMed
2.9field-weighted citation impact, top 8% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

46 citing papers in PubMed, 81 citations in OpenAlex.

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  19. Characterization ofFrontiers in genetics · 2023
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors at 3 institutions in 1 country.

Jia LiuWulanchabu Academy of Agricultural and Husbandry Sciences, Wulanchabu, 012000, Inner Mongolia, China.
Xin PangSuzhou Polytechnic Institute of Agriculture, Suzhou, 215008, Jiangsu, China.
Yuan ChengState Key Laboratory Breeding Base for Zhejiang Sustainable Pest and Disease Control, Institute of Vegetables, Zhejiang Academy of Agricultural Sciences, Hangzhou, China.
Yuhe YinWulanchabu Academy of Agricultural and Husbandry Sciences, Wulanchabu, 012000, Inner Mongolia, China.
Qiang ZhangWulanchabu Academy of Agricultural and Husbandry Sciences, Wulanchabu, 012000, Inner Mongolia, China.
Wenbin SuPlant Protection Institute, Inner Mongolia Academy of Agricultural and Animal Husbandry Sciences, Hohhot, Inner Mongolia, 010031, China.
Bing HuWulanchabu Academy of Agricultural and Husbandry Sciences, Wulanchabu, 012000, Inner Mongolia, China.
Qinwei GuoQuzhou Academy of Agricultural Sciences, Quzhou, 324000, Zhejiang, China.
Si HaPlant Protection Institute, Inner Mongolia Academy of Agricultural and Animal Husbandry Sciences, Hohhot, Inner Mongolia, 010031, China.
Jianping ZhangPlant Protection Institute, Inner Mongolia Academy of Agricultural and Animal Husbandry Sciences, Hohhot, Inner Mongolia, 010031, China. jp_zhang_der@sina.com.
Hongjian WanState Key Laboratory Breeding Base for Zhejiang Sustainable Pest and Disease Control, Institute of Vegetables, Zhejiang Academy of Agricultural Sciences, Hangzhou, China. wanhongjian@sina.com.ORCID http://orcid.org/0000-0001-7426-498X
Inner Mongolia Academy of Agricultural & Animal Husbandry Sciences · CNZheJiang Academy of Agricultural Sciences · CNSuzhou Polytechnic Institute of Agriculture · CN

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Heat shock protein 70 (Hsp70) family members play important roles in protecting plants against abiotic stresses, including salt, drought, heat, and cold. In this study, 20 putative StHsp70 genes were identified in potato (Solanum tuberosum L.) through the integration of the gene structures, chromosome locations, phylogenetic relationships, and expression profiles. These StHsp70 genes were classified into five sub-families based on phylogenetic analysis. Chromosome mapping revealed that they were unevenly and unequally distributed on 10 of the 12 chromosomes. Furthermore, segmental and tandem duplication events contributed to the expansion of the StHsp70 genes. Phylogenetic tree of the HSP70 genes from potato and other plant species revealed multiple sub-families. These findings indicated a common ancestor which had generated diverse sub-families prior to a mono-dicot split. In addition, expression analysis using RNA-seq revealed that the majority of these genes were expressed in at least one of the tested tissue, and were induced by Phytophthora infestans. Then, based on qRT-PCR analysis, the results showed that the transcript levels of some of the StHsp70 genes could be remarkably induced by such abiotic and hormone stresses, which indicated their potential roles in mediating the responses of potato plants to both abiotic and biotic stress conditions.

Indexed as

Gene Expression Regulation, PlantGenome, PlantChromosomes, PlantGene Expression ProfilingHSP70 Heat-Shock ProteinsMultigene FamilyPhylogenyPlant ProteinsSolanum tuberosumStress, PhysiologicalHSP70 Heat-Shock ProteinsPlant Proteins

Identifiers

PMID30413778
PMCPMC6226454
OpenAlexW2900398623

What OpenQuestion holds

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LicenceCC BY
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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.