Evidence map›Paper›PMID 30412272›Full record

ArticleMuscle & nerve2019

Novel SPEG mutations in congenital myopathies: Genotype-phenotype correlations.

Anita E Qualls, Sandra Donkervoort, Johanna C Herkert, Alissa M D'gama, Diana Bharucha-Goebel, James Collins, Katherine R Chao, A Reghan Foley, Mirthe H Schoots, Jan D H Jongbloed and 2 more

Open access · greenAbstract readCase Reports
In one paragraph

Article in Muscle & nerve, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 14 papers.

0numbers the graph read from it
0cells of the map it votes in
14citing papers in PubMed
2.0field-weighted citation impact, top 12% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

14 citing papers in PubMed, 21 citations in OpenAlex.

  1. Article
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  6. Review
  7. Mild congenital myopathy due to a novel variation inIntractable & rare diseases research · 2021
    Article
  8. Review
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  10. Article
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  12. Review
  13. The M-band: The underestimated part of the sarcomere.Biochimica et biophysica acta. Molecular cell research · 2020
    Review
  14. Novel SPEG variant cause centronuclear myopathy in China.Journal of clinical laboratory analysis · 2020
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

12 authors at 9 institutions in 2 countries.

Anita E QuallsDivision of Newborn Medicine, Division of Genetics and Genomics, and The Manton Center for Orphan Disease Research, Boston Children's Hospital and Harvard Medical School, 300 Longwood Avenue, Boston, Massachusetts, 02115, USA.
Sandra DonkervoortNeuromuscular and Neurogenetic Disorders of Childhood, National Institutes of Health, Bethesda, Maryland, USA.
Johanna C HerkertUniversity of Groningen, University Medical Centre Groningen, Department of Genetics, Groningen, the Netherlands.
Alissa M D'gamaDivision of Newborn Medicine, Division of Genetics and Genomics, and The Manton Center for Orphan Disease Research, Boston Children's Hospital and Harvard Medical School, 300 Longwood Avenue, Boston, Massachusetts, 02115, USA.
Diana Bharucha-GoebelNeuromuscular and Neurogenetic Disorders of Childhood, National Institutes of Health, Bethesda, Maryland, USA.
James CollinsMercy Clinic Pediatric Neurology, Springfield, Missouri, USA.
Katherine R ChaoCenter for Mendelian Genomics at the Broad Institute of MIT and Harvard, Boston, Massachusetts, USA.
A Reghan FoleyNeuromuscular and Neurogenetic Disorders of Childhood, National Institutes of Health, Bethesda, Maryland, USA.
Mirthe H SchootsDepartment of Pathology, University of Groningen, University Medical Centre Groningen, Groningen, the Netherlands.
Jan D H JongbloedUniversity of Groningen, University Medical Centre Groningen, Department of Genetics, Groningen, the Netherlands.
Carsten G BönnemannNeuromuscular and Neurogenetic Disorders of Childhood, National Institutes of Health, Bethesda, Maryland, USA.
Pankaj B AgrawalDivision of Newborn Medicine, Division of Genetics and Genomics, and The Manton Center for Orphan Disease Research, Boston Children's Hospital and Harvard Medical School, 300 Longwood Avenue, Boston, Massachusetts, 02115, USA.
Boston Children's Hospital · USNational Institutes of Health · USUniversity Medical Center Groningen · NLBroad Institute · USChildren's National · USDana-Farber/Boston Children's Cancer and Blood Disorders Center · USMercy Clinic Neurology · USNational Institute of Neurological Disorders and Stroke · USUniversity of Groningen · NL

Funding

Molecular and Clinical Manifestations of Matrix and Aggregate MyopathiesZIANS003129 · NINDS · NATIONAL INSTITUTE OF NEUROLOGICAL DISORDERS AND STROKE · PI BÖNNEMANN, CARSTEN · 2011 to 2025
$52.8M
Medical Scientist Training ProgramT32GM007753 · NIGMS · HARVARD UNIVERSITY (MEDICAL SCHOOL) · PI WALENSKY, LOREN DAVID · 1985 to 2021
$50.0M
Joint Center for Mendelian GenomicsUM1HG008900 · NHGRI · BROAD INSTITUTE, INC. · PI O'DONNELL-LURIA, ANNE, REHM, HEIDI L · 2016 to 2020
$16.5M
SPEG is Critical in Skeletal Muscle Development and FunctionR01AR068429 · NIAMS · BOSTON CHILDREN'S HOSPITAL · PI AGRAWAL, PANKAJ B · 2015 to 2019
$1.9M
NHGRI NIH HHS UM1 HG008900NIAMS NIH HHS R01 AR068429NIGMS NIH HHS T32 GM007753
6 · The paper itself

Abstract

introductionCentronuclear myopathies (CNMs) are a subtype of congenital myopathies (CMs) characterized by muscle weakness, predominant type 1 fibers, and increased central nuclei. SPEG (striated preferentially expressed protein kinase) mutations have recently been identified in 7 CM patients (6 with CNMs). We report 2 additional patients with SPEG mutations expanding the phenotype and evaluate genotype-phenotype correlations associated with SPEG mutations.

methodsUsing whole exome/genome sequencing in CM families, we identified novel recessive SPEG mutations in 2 patients.

resultsPatient 1, with severe muscle weakness requiring respiratory support, dilated cardiomyopathy, ophthalmoplegia, and findings of nonspecific CM on muscle biopsy carried a homozygous SPEG mutation (p.Val3062del). Patient 2, with milder muscle weakness, ophthalmoplegia, and CNM carried compound heterozygous mutations (p.Leu728Argfs*82) and (p.Val2997Glyfs*52).

conclusionsThe 2 patients add insight into genotype-phenotype correlations of SPEG-associated CMs. Clinicians should consider evaluating a CM patient for SPEG mutations even in the absence of CNM features. Muscle Nerve 59:357-362, 2019.

Indexed as

BiopsyChildChild, PreschoolConsanguinityExomeFemaleGenetic Association StudiesHumansInfantMaleMuscle ProteinsMuscle, SkeletalMuscle WeaknessMutationMyopathies, Structural, CongenitalProtein Serine-Threonine KinasesMuscle ProteinsProtein Serine-Threonine KinasesSPEG protein, humancardiomyopathycentronuclear myopathiescongenital myopathiesmyotubularin (MTM1)next generation sequencing (NGS)striated preferentially expressed protein kinase (SPEG)

Identifiers

PMID30412272
PMCPMC7288247
OpenAlexW2899878611

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.