Evidence map›Paper›PMID 30409806›Full record

ArticleScience (New York, N.Y.)2018

Quantifying the contribution of recessive coding variation to developmental disorders.

Hilary C Martin, Wendy D Jones, Rebecca McIntyre, Gabriela Sanchez-Andrade, Mark Sanderson, James D Stephenson, Carla P Jones, Juliet Handsaker, Giuseppe Gallone, Michaela Bruntraeger and 30 more

Abstract read
In one paragraph

Article in Science (New York, N.Y.), 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 117 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
117citing papers in PubMed, 1 pooled it
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

117 citing papers in PubMed, 1 synthesis or guideline pooled it.

  1. Pooled it
  2. Trial
  3. Clinical and genetic characterization of intellectual disability.Developmental medicine and child neurology · 2026
    Article
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  9. Review
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  17. Genes & diseases · 2025
    Article
  18. Review
  19. The distribution of highly deleterious variants across human ancestry groups.Proceedings of the National Academy of Sciences of the United States of America · 2025
    Article
  20. Article

57 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

40 authors.

Hilary C MartinWellcome Trust Sanger Institute, Wellcome Trust Genome Campus, Hinxton, UK. hcm@sanger.ac.uk jeff.barrett@genomicsplc.com.ORCID 0000-0002-4454-9084
Wendy D JonesWellcome Trust Sanger Institute, Wellcome Trust Genome Campus, Hinxton, UK.ORCID 0000-0003-4017-3806
Rebecca McIntyreWellcome Trust Sanger Institute, Wellcome Trust Genome Campus, Hinxton, UK.ORCID 0000-0001-5291-1533
Gabriela Sanchez-AndradeWellcome Trust Sanger Institute, Wellcome Trust Genome Campus, Hinxton, UK.
Mark SandersonWellcome Trust Sanger Institute, Wellcome Trust Genome Campus, Hinxton, UK.
James D StephensonWellcome Trust Sanger Institute, Wellcome Trust Genome Campus, Hinxton, UK.ORCID 0000-0002-6427-5703
Carla P JonesWellcome Trust Sanger Institute, Wellcome Trust Genome Campus, Hinxton, UK.ORCID 0000-0002-4329-3267
Juliet HandsakerWellcome Trust Sanger Institute, Wellcome Trust Genome Campus, Hinxton, UK.ORCID 0000-0002-2790-0813
Giuseppe GalloneWellcome Trust Sanger Institute, Wellcome Trust Genome Campus, Hinxton, UK.ORCID 0000-0001-6806-7226
Michaela BruntraegerWellcome Trust Sanger Institute, Wellcome Trust Genome Campus, Hinxton, UK.ORCID 0000-0002-8890-0411
Jeremy F McRaeWellcome Trust Sanger Institute, Wellcome Trust Genome Campus, Hinxton, UK.ORCID 0000-0003-3411-9248
Elena PrigmoreWellcome Trust Sanger Institute, Wellcome Trust Genome Campus, Hinxton, UK.ORCID 0000-0001-8870-0316
Patrick ShortWellcome Trust Sanger Institute, Wellcome Trust Genome Campus, Hinxton, UK.ORCID 0000-0002-7626-6177
Mari NiemiWellcome Trust Sanger Institute, Wellcome Trust Genome Campus, Hinxton, UK.ORCID 0000-0003-0696-6175
Joanna KaplanisWellcome Trust Sanger Institute, Wellcome Trust Genome Campus, Hinxton, UK.
Elizabeth J RadfordWellcome Trust Sanger Institute, Wellcome Trust Genome Campus, Hinxton, UK.ORCID 0000-0002-8336-6045
Nadia AkawiDivision of Cardiovascular Medicine, Radcliffe Department of Medicine, University of Oxford, Oxford, UK.ORCID 0000-0001-6311-7028
Meena BalasubramanianSheffield Clinical Genetics Service, Sheffield Children's NHS Foundation Trust, OPD2, Northern General Hospital, Herries Rd., Sheffield, S5 7AU, UK.ORCID 0000-0003-1488-3695
John DeanDepartment of Genetics, Aberdeen Royal Infirmary, Aberdeen, UK.ORCID 0000-0003-3841-0841
Rachel HortonWessex Clinical Genetics Service, G Level, Princess Anne Hospital, Coxford Road, Southampton SO16 5YA, UK.
Alice HulbertCheshire and Merseyside Clinical Genetic Service, Liverpool Women's NHS Foundation Trust, Crown Street, Liverpool L8 7SS, UK.
Diana S JohnsonSheffield Clinical Genetics Service, Sheffield Children's NHS Foundation Trust, OPD2, Northern General Hospital, Herries Rd., Sheffield, S5 7AU, UK.
Katie JohnsonDepartment of Clinical Genetics, City Hospital Campus, Hucknall Road, Nottingham NG5 1PB, UK.ORCID 0000-0002-7206-6960
Dhavendra KumarInstitute of Cancer and Genetics, University Hospital of Wales, Cardiff, UK.
Sally Ann LynchTemple Street Children's Hospital, Dublin, Ireland.ORCID 0000-0003-3540-1333
Sarju G MehtaDepartment of Clinical Genetics, Cambridge University Hospitals NHS Foundation Trust, Cambridge, UK.ORCID 0000-0003-0446-3435
Jenny MortonClinical Genetics Unit, Birmingham Women's Hospital, Edgbaston, Birmingham B15 2TG, UK.
Michael J ParkerSheffield Clinical Genetics Service, Sheffield Children's Hospital, Western Bank, Sheffield S10 2TH, UK.
Miranda SplittNorthern Genetics Service, Newcastle upon Tyne Hospitals, NHS Foundation Trust, Newcastle upon Tyne, UK.ORCID 0000-0002-8906-7580
Peter D TurnpennyClinical Genetics, Royal Devon and Exeter NHS Foundation Trust, Exeter, UK.ORCID 0000-0002-5947-0897
Pradeep C VasudevanDepartment of Clinical Genetics, University Hospitals of Leicester NHS Trust, Leicester Royal Infirmary, Leicester LE1 5WW, UK.
Michael WrightNorthern Genetics Service, Newcastle upon Tyne Hospitals, NHS Foundation Trust, Newcastle upon Tyne, UK.ORCID 0000-0001-7483-5404
Andrew BassettWellcome Trust Sanger Institute, Wellcome Trust Genome Campus, Hinxton, UK.ORCID 0000-0003-1632-9137
Sebastian S GeretyWellcome Trust Sanger Institute, Wellcome Trust Genome Campus, Hinxton, UK.ORCID 0000-0002-6126-5040
Caroline F WrightUniversity of Exeter Medical School, Institute of Biomedical and Clinical Science, Research, Innovation, Learning and Development (RILD), Royal Devon and Exeter Hospital, Barrack Road, Exeter, EX2 5DW, UK.ORCID 0000-0003-2958-5076
David R FitzPatrickMedical Research Council (MRC) Human Genetics Unit, MRC Institute of Genetics and Molecular Medicine (IGMM), University of Edinburgh, Western General Hospital, Edinburgh EH4 2XU, UK.ORCID 0000-0003-4861-969X
Helen V FirthWellcome Trust Sanger Institute, Wellcome Trust Genome Campus, Hinxton, UK.ORCID 0000-0002-6410-0882
Matthew E HurlesWellcome Trust Sanger Institute, Wellcome Trust Genome Campus, Hinxton, UK.
Jeffrey C BarrettWellcome Trust Sanger Institute, Wellcome Trust Genome Campus, Hinxton, UK. hcm@sanger.ac.uk jeff.barrett@genomicsplc.com.ORCID 0000-0002-1152-370X
Deciphering Developmental Disorders Study

Funding

Medical Research Council MC_UU_00007/3Wellcome Trust 091986Wellcome Trust 098051
6 · The paper itself

Abstract

We estimated the genome-wide contribution of recessive coding variation in 6040 families from the Deciphering Developmental Disorders study. The proportion of cases attributable to recessive coding variants was 3.6% in patients of European ancestry, compared with 50% explained by de novo coding mutations. It was higher (31%) in patients with Pakistani ancestry, owing to elevated autozygosity. Half of this recessive burden is attributable to known genes. We identified two genes not previously associated with recessive developmental disorders,

Indexed as

Genes, RecessiveGenetic CodeGenetic VariationPenetranceAnimalsDevelopmental DisabilitiesDisease Models, AnimalEukaryotic Initiation Factor-3EuropeGenome-Wide Association StudyHumansJumonji Domain-Containing Histone DemethylasesMiceNuclear ProteinsPakistanPhylogenyEIF3F protein, humanEukaryotic Initiation Factor-3Jumonji Domain-Containing Histone DemethylasesKDM5B protein, humanNuclear ProteinsRepressor Proteins

Identifiers

PMID30409806
PMCPMC6726470

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.