Evidence map›Paper›PMID 30409225›Full record

ArticleStem cell research & therapy2018

Key genes and integrated modules in hematopoietic differentiation of human embryonic stem cells: a comprehensive bioinformatic analysis.

Pengfei Li, Mengyao Wu, Qiwang Lin, Shu Wang, Tong Chen, Hua Jiang

Open access · goldAbstract read
In one paragraph

Article in Stem cell research & therapy, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 9 papers.

0numbers the graph read from it
0cells of the map it votes in
9citing papers in PubMed
0.9field-weighted citation impact, top 25% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

9 citing papers in PubMed, 16 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 3 institutions in 1 country.

Pengfei LiDepartment of Hematology, Huashan Hospital, Fudan University, Shanghai, 200040, China.
Mengyao WuDepartment of Hematology, Huashan Hospital, Fudan University, Shanghai, 200040, China.
Qiwang LinDepartment of Gynecology, Obstetrics and Gynecology Hospital, Fudan University, Shanghai, 200011, China.
Shu WangDepartment of Hematology, Huashan Hospital, Fudan University, Shanghai, 200040, China.
Tong ChenDepartment of Hematology, Huashan Hospital, Fudan University, Shanghai, 200040, China. chentong@fudan.edu.cn.
Hua JiangDepartment of Gynecology, Obstetrics and Gynecology Hospital, Fudan University, Shanghai, 200011, China. jianghua@fudan.edu.cn.
Fudan University · CNObstetrics and Gynecology Hospital of Fudan University · CNHuashan Hospital · CN

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

backgroundThe generation of hematopoietic stem cells (HSCs) and blood cells from human embryonic stem cells (hESCs) is a major goal for regenerative medicine; however, the differentiation mechanisms are largely undefined. Here, we aimed to identify the regulated genes and functional modules related to the early differentiation of the endothelial-to-hematopoietic transition (EHT) using comprehensive bioinformatics analyses.

methodsUndifferentiated hESCs (hESC-H9), CD34

resultsIn the present study, we identified 11,262 DEGs and 16 time-series profiles that were enriched in biological processes of chromosome segregation, cell cycle, and leukocyte activation and differentiation, as well as hematopoiesis. Analysis using the MCODE algorithm further identified six integrated modules that might play an important role in the EHT process, including mitosis/cell cycle, mitochondrial process, splicing, ubiquitination, ribosome, and apoptosis.

conclusionsThe study identified potential genes and integrated functional modules associated with the hematopoietic and endothelial differentiation of human ESCs.

Indexed as

Gene Expression ProfilingAlgorithmsAnimalsCell DifferentiationCell LineComputational BiologyGene Expression RegulationGene OntologyHematopoietic Stem CellsHuman Embryonic Stem CellsHumansMiceMolecular Sequence AnnotationProtein Interaction MapsDifferentiationEmbryonic stem cellHematopoietic stem cellMicroarray

Identifiers

PMID30409225
PMCPMC6225692
OpenAlexW2899521530

What OpenQuestion holds

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LicenceCC BY
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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.