ArticlePloS one2018
Phylogenetic relationships in the genus Avena based on the nuclear Pgk1 gene.
Article in PloS one, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 11 papers.
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Who cites it
11 citing papers in PubMed.
- Transposable element dynamics drive rapid evolution of centromere architecture in the Avena genus.Genome biology · 2026Article
- Super-pangenome analyses across 35 accessions of 23 Avena species highlight their complex evolutionary history and extensive genomic diversity.Nature genetics · 2025Article
- High-quality genome of allotetraploid Avena barbata provides insights into the origin and evolution of B subgenome in Avena.Journal of integrative plant biology · 2025Article
- Participation of Wild Species GenusPlants (Basel, Switzerland) · 2025Article
- The potential spatiotemporal distribution patterns of Avena nuda and Avena sativa from global perspective provide new insights for the cultivation of commonly cultivated oats.BMC plant biology · 2025Article
- Oat chromosome and genome evolution defined by widespread terminal intergenomic translocations in polyploids.Frontiers in plant science · 2022Article
- CicerSpTEdb: A web-based database for high-resolution genome-wide identification of transposable elements in Cicer species.PloS one · 2021Article
- Cytogenetic evidence supports Avena insularis being closely related to hexaploid oats.PloS one · 2021Article
- New evidence confirming the CD genomic constitutions of the tetraploid Avena species in the section Pachycarpa Baum.PloS one · 2021Article
- Comparative chloroplast genome analyses of Avena: insights into evolutionary dynamics and phylogeny.BMC plant biology · 2020Article
- Comparative linkage mapping of diploid, tetraploid, and hexaploid Avena species suggests extensive chromosome rearrangement in ancestral diploids.Scientific reports · 2019Article
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8 authors.
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Abstract
The phylogenetic relationships among 76 Avena taxa, representing 14 diploids, eight tetraploids, and four hexaploids were investigated by using the nuclear plastid 3-phosphoglycerate kinase gene (Pgk1). A significant deletion (131 bp) was detected in all the C genome homoeologues which reconfirmed a major structural divergence between the A and C genomes. Phylogenetic analysis indicated the Cp genome is more closely related to the polyploid species than is the Cv genome. Two haplotypes of Pgk1 gene were obtained from most of the AB genome tetraploids. Both types of the barbata group showed a close relationship with the As genome diploid species, supporting the hypothesis that both the A and B genomes are derived from an As genome. Two haplotypes were also detected in A. agadiriana, which showed close relationships with the As genome diploid and the Ac genome diploid, respectively, emphasizing the important role of the Ac genome in the evolution of A. agadiriana. Three homoeologues of the Pgk1 gene were detected in five hexaploid accessions. The homoeologues that might represent the D genome were tightly clustered with the tetraploids A. maroccana and A. murphyi, but did not show a close relationship with any extant diploid species.
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