ArticlePlant biotechnology journal2019
Hybridisation-based target enrichment of phenology genes to dissect the genetic basis of yield and adaptation in barley.
Article in Plant biotechnology journal, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 20 papers.
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20 citing papers in PubMed, 47 citations in OpenAlex.
- Machine learning to predict genotypes and genotype-environment interaction associated with complex traits for genomic selection.Plant phenomics (Washington, D.C.) · 2026Article
- Diversity of Gibberellin 2-oxidase genes in the barley genome offers opportunities for genetic improvement.Journal of advanced research · 2024Article
- New semi-dwarfing alleles with increased coleoptile length by gene editing of gibberellin 3-oxidase 1 using CRISPR-Cas9 in barley (Hordeum vulgare L.).Plant biotechnology journal · 2023Article
- Preadapted to adapt: underpinnings of adaptive plasticity revealed by the downy brome genome.Communications biology · 2023Article
- Genome architecture and diverged selection shaping pattern of genomic differentiation in wild barley.Plant biotechnology journal · 2023Article
- Multi-locus genome-wide association studies reveal novel alleles for flowering time under vernalisation and extended photoperiod in a barley MAGIC population.TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik · 2022Article
- Genomic structural equation modelling provides a whole-system approach for the future crop breeding.TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik · 2021Article
- Major flowering time genes of barley: allelic diversity, effects, and comparison with wheat.TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik · 2021Review
- Highly efficient and genotype-independent barley gene editing based on anther culture.Plant communications · 2021Article
- Responses of Barley to High Ambient Temperature Are Modulated by Vernalization.Frontiers in plant science · 2021Article
- Novel Design of Imputation-Enabled SNP Arrays for Breeding and Research Applications Supporting Multi-Species Hybridization.Frontiers in plant science · 2021Article
- Article
- Genome-wide association mapping reveals novel genes associated with coleoptile length in a worldwide collection of barley.BMC plant biology · 2020Article
- Genetic dissection of the interactions between semi-dwarfing genesMolecular breeding : new strategies in plant improvement · 2020Article
- Characterization of Genetic Diversity and Genome-Wide Association Mapping of Three Agronomic Traits in Qingke Barley (Frontiers in genetics · 2020Article
- Genome-Wide Association Study and Identification of Candidate Genes for Nitrogen Use Efficiency in Barley (Frontiers in plant science · 2020Article
- Genome-Wide Association Study of Salinity Tolerance During Germination in Barley (Frontiers in plant science · 2020Article
- Gene-set association and epistatic analyses reveal complex gene interaction networks affecting flowering time in a worldwide barley collection.Journal of experimental botany · 2019Article
- Targeted enrichment by solution-based hybrid capture to identify genetic sequence variants in barley.Scientific data · 2019Article
- Harnessing Novel Diversity From Landraces to Improve an Elite Barley Variety.Frontiers in plant science · 2019Article
Corrections and comments
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Authors and funding
15 authors at 7 institutions in 3 countries.
Funding
No grant is acknowledged in the PubMed record.
Abstract
Barley (Hordeum vulgare L.) is a major cereal grain widely used for livestock feed, brewing malts and human food. Grain yield is the most important breeding target for genetic improvement and largely depends on optimal timing of flowering. Little is known about the allelic diversity of genes that underlie flowering time in domesticated barley, the genetic changes that have occurred during breeding, and their impact on yield and adaptation. Here, we report a comprehensive genomic assessment of a worldwide collection of 895 barley accessions based on the targeted resequencing of phenology genes. A versatile target-capture method was used to detect genome-wide polymorphisms in a panel of 174 flowering time-related genes, chosen based on prior knowledge from barley, rice and Arabidopsis thaliana. Association studies identified novel polymorphisms that accounted for observed phenotypic variation in phenology and grain yield, and explained improvements in adaptation as a result of historical breeding of Australian barley cultivars. We found that 50% of genetic variants associated with grain yield, and 67% of the plant height variation was also associated with phenology. The precise identification of favourable alleles provides a genomic basis to improve barley yield traits and to enhance adaptation for specific production areas.
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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.