Evidence map›Paper›PMID 30407585›Full record

ArticleNucleic acids research2018

Structure of human telomere G-quadruplex in the presence of a model drug along the thermal unfolding pathway.

Federico Bianchi, Lucia Comez, Ralf Biehl, Francesco D'Amico, Alessandro Gessini, Marialucia Longo, Claudio Masciovecchio, Caterina Petrillo, Aurel Radulescu, Barbara Rossi and 4 more

Open access · goldAbstract read
In one paragraph

Article in Nucleic acids research, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 16 papers.

0numbers the graph read from it
0cells of the map it votes in
16citing papers in PubMed
1.6field-weighted citation impact, top 16% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

16 citing papers in PubMed, 38 citations in OpenAlex.

  1. Article
  2. Article
  3. Review
  4. Destabilizing Interactions in Human Telomeric G-Quadruplex Multimers.The journal of physical chemistry letters · 2025
    Article
  5. Article
  6. Dynamic Structures and Fast Transition Kinetics of Oxidized G-Quadruplexes.Small (Weinheim an der Bergstrasse, Germany) · 2024
    Article
  7. Article
  8. Stacking Interactions and Flexibility of Human Telomeric Multimers.Journal of the American Chemical Society · 2023
    Article
  9. Article
  10. Article
  11. Article
  12. Article
  13. Article
  14. PhenQE8, a Novel Ligand of the Human Telomeric Quadruplex.International journal of molecular sciences · 2021
    Article
  15. Article
  16. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

14 authors at 5 institutions in 2 countries.

Federico BianchiDipartimento di Fisica e Geologia, Università di Perugia, 06123 Perugia, Italy.
Lucia ComezIOM-CNR c/o Dipartimento di Fisica e Geologia, Università di Perugia, 06123 Perugia, Italy.
Ralf BiehlJCNS & ICS, Forschungszentrum Jülich GmbH, Leo-Brandt Strasse, 52425 Jülich, Germany.
Francesco D'AmicoElettra-Sincrotrone Trieste, Strada Statale 14 - km 163,5 in AREA Science Park, 34149 Basovizza, Trieste, Italy.
Alessandro GessiniElettra-Sincrotrone Trieste, Strada Statale 14 - km 163,5 in AREA Science Park, 34149 Basovizza, Trieste, Italy.
Marialucia LongoJCNS at Heinz Maier-Leibnitz Zentrum (MLZ), Forschungszentrum Juelich GmbH, Lichtenbergstrasse 1, 85748 Garching, Germany.
Claudio MasciovecchioElettra-Sincrotrone Trieste, Strada Statale 14 - km 163,5 in AREA Science Park, 34149 Basovizza, Trieste, Italy.
Caterina PetrilloDipartimento di Fisica e Geologia, Università di Perugia, 06123 Perugia, Italy.
Aurel RadulescuJCNS at Heinz Maier-Leibnitz Zentrum (MLZ), Forschungszentrum Juelich GmbH, Lichtenbergstrasse 1, 85748 Garching, Germany.
Barbara RossiElettra-Sincrotrone Trieste, Strada Statale 14 - km 163,5 in AREA Science Park, 34149 Basovizza, Trieste, Italy.
Francesco SacchettiDipartimento di Fisica e Geologia, Università di Perugia, 06123 Perugia, Italy.
Federico SebastianiLehrstuhl für Physikalische Chemie 2, Ruhr-Universität Bochum, 44780 Bochum, Germany.
Nicolò VioliniJCNS, Forschungszentrum Jülich GmbH, Leo-Brandt Strasse, 52425 Jülich, Germany.
Alessandro PaciaroniDipartimento di Fisica e Geologia, Università di Perugia, 06123 Perugia, Italy.
University of Perugia · ITElettra-Sincrotrone Trieste S.C.p.A. · ITForschungszentrum Jülich · DEHeinz Maier-Leibnitz Zentrum · DERuhr University Bochum · DE

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

A multi-technique approach, combining circular dichroism spectroscopy, ultraviolet resonance Raman spectroscopy and small angle scattering techniques, has been deployed to elucidate how the structural features of the human telomeric G-quadruplex d[A(GGGTTA)3GGG] (Tel22) change upon thermal unfolding. The system is studied both in the free form and when it is bound to Actinomycin D (ActD), an anticancer ligand with remarkable conformational flexibility. We find that at room temperature binding of Tel22 with ActD involves end-stacking upon the terminal G-tetrad. Structural evidence for drug-driven dimerization of a significant fraction of the G-quadruplexes is provided. When the temperature is raised, both free and bound Tel22 undergo melting through a multi-state process. We show that in the intermediate states of Tel22 the conformational equilibrium is shifted toward the (3+1) hybrid-type, while a parallel structure is promoted in the complex. The unfolded state of the free Tel22 is consistent with a self-avoiding random-coil conformation, whereas the high-temperature state of the complex is observed to assume a quite compact form. Such an unprecedented high-temperature arrangement is caused by the persistent interaction between Tel22 and ActD, which stabilizes compact conformations even in the presence of large thermal structural fluctuations.

Indexed as

G-QuadruplexesAnti-Bacterial AgentsAntineoplastic AgentsBinding SitesDactinomycinDimerizationHot TemperatureHumansKineticsLigandsModels, MolecularNucleic Acid DenaturationTelomereThermodynamicsAnti-Bacterial AgentsAntineoplastic AgentsDactinomycinLigands

Identifiers

PMID30407585
PMCPMC6294516
OpenAlexW2904703823

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.