Evidence map›Paper›PMID 30407581›Full record

ArticleToxicological sciences : an official journal of the Society of Toxicology2019

Pharmacological Activation of PXR and CAR Downregulates Distinct Bile Acid-Metabolizing Intestinal Bacteria and Alters Bile Acid Homeostasis.

Joseph L Dempsey, Dongfang Wang, Gunseli Siginir, Qiang Fei, Daniel Raftery, Haiwei Gu, Julia Yue Cui

Open access · bronzeAbstract read
In one paragraph

Article in Toxicological sciences : an official journal of the Society of Toxicology, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 34 papers.

0numbers the graph read from it
0cells of the map it votes in
34citing papers in PubMed
2.5field-weighted citation impact, top 8% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

34 citing papers in PubMed, 51 citations in OpenAlex.

  1. Review
  2. Role of Bile Acid Receptors in Non-Infectious Diarrhea: A Narrative Review.Medical science monitor : international medical journal of experimental and clinical research · 2026
    Review
  3. Article
  4. Expansion resistance against genotoxicFrontiers in microbiology · 2026
    Article
  5. Review
  6. Article
  7. Review
  8. Article
  9. Article
  10. Article
  11. Review
  12. Bile Acid and Gut Microbiota in Irritable Bowel Syndrome.Journal of neurogastroenterology and motility · 2022
    Review
  13. Multi-Omics Strategies for Investigating the Microbiome in Toxicology Research.Toxicological sciences : an official journal of the Society of Toxicology · 2022
    Review
  14. Article
  15. Pregnane X Receptor and the Gut-Liver Axis: A Recent Update.Drug metabolism and disposition: the biological fate of chemicals · 2022
    Review
  16. Article
  17. Contributions of bile acids to gastrointestinal physiology as receptor agonists and modifiers of ion channels.American journal of physiology. Gastrointestinal and liver physiology · 2022
    Article
  18. Article
  19. Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 2 institutions in 2 countries.

Joseph L DempseyDepartment of Environmental and Occupational Health Sciences, University of Washington, Seattle, Washington 98105.
Dongfang WangDepartment of Anesthesiology and Pain Medicine, University of Washington, Seattle, Washington 98109.
Gunseli SiginirDepartment of Environmental and Occupational Health Sciences, University of Washington, Seattle, Washington 98105.
Qiang FeiDepartment of Anesthesiology and Pain Medicine, University of Washington, Seattle, Washington 98109.
Daniel RafteryDepartment of Anesthesiology and Pain Medicine, University of Washington, Seattle, Washington 98109.
Haiwei GuArizona Metabolomics Laboratory, Center for Metabolic and Vascular Biology, School of Nutrition and Health Promotion, College of Health Solutions, Arizona State University, Phoenix, Arizona 85004.
Julia Yue CuiDepartment of Environmental and Occupational Health Sciences, University of Washington, Seattle, Washington 98105.
University of Washington · USArizona State University · US

Funding

XENOBIOTIC BIOTRANSFORMATION AND DISPOSITIONP30ES007033 · NIEHS · UNIVERSITY OF WASHINGTON · PI Sheela Sathyanarayana · 1995 to 2026
$42.5M
Environmetal Pathology/Toxicology Training ProgramT32ES007032 · NIEHS · UNIVERSITY OF WASHINGTON · PI FAUSTMAN, ELAINE M, ROSENFELD, MICHAEL E · 1985 to 2023
$10.7M
Developmental Regulation of Drug Metabolism by Targeting the Gut MicrobiomeR01GM111381 · NIGMS · UNIVERSITY OF WASHINGTON · PI CUI, JULIA YUE · 2014 to 2018
$1.5M
NIEHS NIH HHS P30 ES007033NIEHS NIH HHS T32 ES007032NIGMS NIH HHS R01 GM111381
6 · The paper itself

Abstract

The gut microbiome regulates important host metabolic pathways including xenobiotic metabolism and intermediary metabolism, such as the conversion of primary bile acids (BAs) into secondary BAs. The nuclear receptors pregnane X receptor (PXR) and constitutive androstane receptor (CAR) are well-known regulators for xenobiotic biotransformation in liver. However, little is known regarding the potential effects of PXR and CAR on the composition and function of the gut microbiome. To test our hypothesis that activation of PXR and CAR regulates gut microbiota and secondary BA synthesis, 9-week-old male conventional and germ-free mice were orally gavaged with corn oil, PXR agonist PCN (75 mg/kg), or CAR agonist TCPOBOP (3 mg/kg) once daily for 4 days. PCN and TCPOBOP decreased two taxa in the Bifidobacterium genus, which corresponded with decreased gene abundance of the BA-deconjugating enzyme bile salt hydrolase. In liver and small intestinal content of germ-free mice, there was a TCPOBOP-mediated increase in total, primary, and conjugated BAs corresponding with increased Cyp7a1 mRNA. Bifidobacterium, Dorea, Peptociccaceae, Anaeroplasma, and Ruminococcus positively correlated with T-UDCA in LIC, but negatively correlated with T-CDCA in serum. In conclusion, PXR and CAR activation downregulates BA-metabolizing bacteria in the intestine and modulates BA homeostasis in a gut microbiota-dependent manner.

Indexed as

AnimalsBacteriaBile Acids and SaltsCholesterol 7-alpha-HydroxylaseConstitutive Androstane ReceptorCytochrome P-450 Enzyme SystemDown-RegulationGastrointestinal MicrobiomeHomeostasisIntestine, LargeLiverMaleMiceMice, Inbred C57BLPregnane X ReceptorPregnenolone Carbonitrile1,4-bis(2-(3,5-dichloropyridyloxy))benzeneBile Acids and SaltsCholesterol 7-alpha-HydroxylaseConstitutive Androstane ReceptorCyp7a1 protein, mousecytochrome P-450 2C70, mousecytochrome P-450 CYP2C subfamilyCytochrome P-450 Enzyme SystemPregnane X ReceptorPregnenolone CarbonitrilePyridinesReceptors, Cytoplasmic and Nuclear16S rDNA sequencingbile acid metabolismCARgut-liver axisgut microbiomeintestineliverliver metabolismnuclear receptorsPXR

Identifiers

PMID30407581
PMCPMC6821357
OpenAlexW2899763104

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.