Evidence map›Paper›PMID 30407201›Full record

ArticleJournal of synchrotron radiation2018

Sirepo: an open-source cloud-based software interface for X-ray source and optics simulations.

Maksim S Rakitin, Paul Moeller, Robert Nagler, Boaz Nash, David L Bruhwiler, Dmitry Smalyuk, Mikhail Zhernenkov, Oleg Chubar

Abstract read
In one paragraph

Article in Journal of synchrotron radiation, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 5 papers.

0numbers the graph read from it
0cells of the map it votes in
5citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

5 citing papers in PubMed.

  1. Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors.

Maksim S RakitinNSLS-II, Brookhaven National Laboratory, Upton, NY, USA.ORCID 0000-0003-3685-852X
Paul MoellerRadiaSoft LLC, Boulder, CO, USA.
Robert NaglerRadiaSoft LLC, Boulder, CO, USA.
Boaz NashRadiaSoft LLC, Boulder, CO, USA.
David L BruhwilerRadiaSoft LLC, Boulder, CO, USA.
Dmitry SmalyukEarl L. Vandermeulen High School, Port Jefferson, NY, USA.
Mikhail ZhernenkovNSLS-II, Brookhaven National Laboratory, Upton, NY, USA.
Oleg ChubarNSLS-II, Brookhaven National Laboratory, Upton, NY, USA.

Funding

U.S. Department of Energy DE-SC0006284U.S. Department of Energy DE-SC0011237
6 · The paper itself

Abstract

Sirepo, a browser-based GUI for X-ray source and optics simulations, is presented. Such calculations can be performed using SRW (Synchrotron Radiation Workshop), which is a physical optics computer code, allowing simulation of entire experimental beamlines using the concept of a `virtual beamline' with accurate treatment of synchrotron radiation generation and propagation through the X-ray optical system. SRW is interfaced with Sirepo by means of a Python application programming interface. Sirepo supports most of the optical elements currently used at beamlines, including recent developments in SRW. In particular, support is provided for the simulation of state-of-the-art X-ray beamlines, exploiting the high coherence and brightness of modern light source facilities. New scientific visualization and reporting capabilities have been recently implemented within Sirepo, as well as automatic determination of electron beam and undulator parameters. Publicly available community databases can be dynamically queried for error-free access to material characteristics. These computational tools can be used for the development and commissioning of new X-ray beamlines and for testing feasibility and optimization of experiments. The same interface can guide simulation on a local computer, a remote server or a high-performance cluster. Sirepo is available online and also within the NSLS-II firewall, with a growing number of users at other light source facilities. Our open source code is available on GitHub.

Indexed as

cloud-based softwareSirepoSynchrotron Radiation Workshop (SRW)X-ray optics simulations

Identifiers

PMID30407201
PMCPMC6225744

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.