Evidence map›Paper›PMID 30406882›Full record

ArticleWorld journal of microbiology & biotechnology2018

Modulation of S. aureus and P. aeruginosa biofilm: an in vitro study with new coumarin derivatives.

Tapas Das, Manash C Das, Antu Das, Sukhen Bhowmik, Padmani Sandhu, Yusuf Akhter, Surajit Bhattacharjee, Utpal Ch De

Erratum issuedAbstract read
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In one paragraph

Article in World journal of microbiology & biotechnology, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. An erratum has been issued. Cited by 10 papers.

0numbers the graph read from it
0cells of the map it votes in
10citing papers in PubMed
1.4field-weighted citation impact, top 20% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

10 citing papers in PubMed, 18 citations in OpenAlex.

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4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

8 authors at 2 institutions in 1 country.

Tapas DasDepartment of Chemistry, Tripura University, Suryamaninagar, Tripura, 799022, India.
Manash C DasDepartment of Molecular Biology & Bioinformatics, Tripura University, Suryamaninagar, Tripura, 799022, India.
Antu DasDepartment of Molecular Biology & Bioinformatics, Tripura University, Suryamaninagar, Tripura, 799022, India.
Sukhen BhowmikDepartment of Chemistry, Tripura University, Suryamaninagar, Tripura, 799022, India.
Padmani SandhuCentre for Computational Biology and Bioinformatics, School of Life Sciences, Central University of Himachal Pradesh, Shahpur, District-Kangra, Himachal Pradesh, 176206, India.
Yusuf AkhterCentre for Computational Biology and Bioinformatics, School of Life Sciences, Central University of Himachal Pradesh, Shahpur, District-Kangra, Himachal Pradesh, 176206, India.
Surajit BhattacharjeeDepartment of Molecular Biology & Bioinformatics, Tripura University, Suryamaninagar, Tripura, 799022, India. sbhattacharjee@gmail.com.
Utpal Ch DeDepartment of Chemistry, Tripura University, Suryamaninagar, Tripura, 799022, India. ucd1972@tripurauniv.in.
Tripura University · INCentral University of Himachal Pradesh · IN

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Coumarin is an important heterocyclic molecular framework of bioactive molecules against broad spectrum pathological manifestations. In the present study 18 new coumarin derivatives (CDs) were synthesized and characterized for antibiofilm activity against two model bacteria such as Staphylococcus aureus and Pseudomonas aeruginosa. It was observed that all the CDs executed significant effect in moderating activities against both planktonic and biofilm forms of these selected bacteria. Hence, to interpret the underlying probable reason of such antibiofilm effect, in-silico binding study of CDs with biofilm and motility associated proteins of these organisms were performed. All CDs have shown their propensity for occupying the native substrate binding pocket of each protein with moderate to strong binding affinities. One of the CDs such as CAMN1 showed highest binding affinity with these proteins. Interestingly, the findings of in-silico studies coincides the experimental results of antibiofilm and motility affect of CDs against both S. aureus and P. aeruginosa. Moreover, in-silico studies suggested that the antibiofilm activity of test CDs may be due to the interference of biofilm and motility associated proteins of the selected model organisms (PilT from P. aeruginosa and TarK, TarO from S. aureus). The detailed synthesis, characterization, methodology and results of biological screening along with computational studies have been reported. This study could be of greater interest in the context of the development of new anti-bacterial agent in the future.

Indexed as

Adhesins, BacterialAnti-Bacterial AgentsBacterial ProteinsBinding SitesBiofilmsComputer SimulationCoumarinsHeterocyclic CompoundsMicrobial Sensitivity TestsModels, MolecularPhenotypePseudomonas aeruginosaStaphylococcus aureusAdhesins, BacterialAnti-Bacterial AgentsBacterial ProteinsCoumarinsHeterocyclic CompoundsAminocoumarinAntibacterialAntibiofilmCoumarin amideCoumarin derivativeHeterocyclic

Identifiers

PMID30406882
OpenAlexW2900202055

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.