Evidence map›Paper›PMID 30405713›Full record

ArticleInternational journal of endocrinology2018

Clinical, Genetics, and Bioinformatic Characterization of Mutations Affecting an Essential Region of

Ting Chen, Haiying Wu, Chenxi Zhang, Jiarong Feng, Linqi Chen, Rongrong Xie, Fengyun Wang, Xiuli Chen, Huiting Zhou, Hui Sun and 1 more

Open access · goldAbstract read
In one paragraph

Article in International journal of endocrinology, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 12 papers.

0numbers the graph read from it
0cells of the map it votes in
12citing papers in PubMed
1.3field-weighted citation impact, top 17% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

12 citing papers in PubMed, 14 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
  4. Article
  5. Current Status of Next-Generation Sequencing in Bone Genetic Diseases.International journal of molecular sciences · 2023
    Review
  6. Early-Onset Osteoporosis: Rare Monogenic Forms Elucidate the Complexity of Disease Pathogenesis Beyond Type I Collagen.Journal of bone and mineral research : the official journal of the American Society for Bone and Mineral Research · 2022
    Review
  7. Article
  8. Plastin 3 in health and disease: a matter of balance.Cellular and molecular life sciences : CMLS · 2021
    Review
  9. Review
  10. Article
  11. Plastin 3 in X-Linked Osteoporosis: Imbalance of CaFrontiers in cell and developmental biology · 2020
    Review
  12. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors at 1 institution in 1 country.

Ting ChenDepartment of Endocrinology, Metabolism, and Genetic Diseases, Children's Hospital of Soochow University, Suzhou, Jiangsu, China.ORCID 0000-0003-0179-3586
Haiying WuDepartment of Endocrinology, Metabolism, and Genetic Diseases, Children's Hospital of Soochow University, Suzhou, Jiangsu, China.ORCID 0000-0001-8751-4407
Chenxi ZhangSchool of Biology & Basic Medical Sciences, Medical College of Soochow University, Soochow University, Suzhou, Jiangsu, China.
Jiarong FengSchool of Biology & Basic Medical Sciences, Medical College of Soochow University, Soochow University, Suzhou, Jiangsu, China.ORCID 0000-0001-7706-1395
Linqi ChenDepartment of Endocrinology, Metabolism, and Genetic Diseases, Children's Hospital of Soochow University, Suzhou, Jiangsu, China.ORCID 0000-0002-1763-630X
Rongrong XieDepartment of Endocrinology, Metabolism, and Genetic Diseases, Children's Hospital of Soochow University, Suzhou, Jiangsu, China.ORCID 0000-0003-0305-4752
Fengyun WangDepartment of Endocrinology, Metabolism, and Genetic Diseases, Children's Hospital of Soochow University, Suzhou, Jiangsu, China.ORCID 0000-0001-6401-8347
Xiuli ChenDepartment of Endocrinology, Metabolism, and Genetic Diseases, Children's Hospital of Soochow University, Suzhou, Jiangsu, China.ORCID 0000-0002-2576-4256
Huiting ZhouInstitute of Pediatric Research, Children's Hospital of Soochow University, Suzhou, Jiangsu, China.
Hui SunDepartment of Endocrinology, Metabolism, and Genetic Diseases, Children's Hospital of Soochow University, Suzhou, Jiangsu, China.ORCID 0000-0002-9949-7218
Fei XiaoSchool of Biology & Basic Medical Sciences, Medical College of Soochow University, Soochow University, Suzhou, Jiangsu, China.ORCID 0000-0001-5262-2475
Soochow University · CN

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

backgroundBone mineral density quantitative trait locus 18 (BMND18, OMIM #300910) is a type of early-onset osteogenesis imperfecta (OI) caused by loss-of-function mutations in the PLS3 gene, which encodes plastin-3, a key protein in the formation of actin bundles throughout the cytoskeleton. Here, we report a patient with PLS3 mutation caused BMND18 and evaluated all the reported disease-causing mutations by bioinformatic analysis.

methodsTargeted gene sequencing was performed to find the disease-causing mutation in our patient. Bioinformatic analyses mainly including homology modelling and molecular dynamics stimulation were conducted to explore the impact of the previously reported mutations on plastin-3.

resultsGene sequencing showed a novel nonsense mutation (c.745G > T, p.E249X), which locates at a highly conserved region containing residues p.240-266 (LOOP-1) in the PLS3 gene. Further bioinformatic analyses of the previously reported mutations revealed that LOOP-1 is predicted to physically connect the calponin-homology 1 (CH1) and CH2 domains of the ABD1 fragment and spatially locates within the interface of ABD1 and ABD2. It is crucial to the conformation transition and actin-binding function of plastin-3.

conclusionsThis report identified a novel mutation that truncates the PLS3 gene. Moreover, bioinformatic analyses of the previous reported mutations in

Identifiers

PMID30405713
PMCPMC6204236
OpenAlexW2896348157

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.