Evidence map›Paper›PMID 30405687›Full record

ArticleFrontiers in genetics2018

Global Transcriptome Analysis During Adipogenic Differentiation and Involvement of Transthyretin Gene in Adipogenesis in Cattle.

Hanfang Cai, Mingxun Li, Xiaomei Sun, Martin Plath, Congjun Li, Xianyong Lan, Chuzhao Lei, Yongzhen Huang, Yueyu Bai, Xinglei Qi and 2 more

Open access · goldAbstract read
In one paragraph

Article in Frontiers in genetics, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 22 papers.

0numbers the graph read from it
0cells of the map it votes in
22citing papers in PubMed
3.7field-weighted citation impact, top 6% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

22 citing papers in PubMed, 49 citations in OpenAlex.

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  17. Overexpression ofAnimals : an open access journal from MDPI · 2020
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

12 authors at 3 institutions in 2 countries.

Hanfang CaiCollege of Animal Science and Technology, Northwest A&F University, Yangling, China.
Mingxun LiCollege of Animal Science and Technology, Northwest A&F University, Yangling, China.
Xiaomei SunCollege of Animal Science and Technology, Northwest A&F University, Yangling, China.
Martin PlathCollege of Animal Science and Technology, Northwest A&F University, Yangling, China.
Congjun LiAnimal Genomics and Improvement Laboratory, United States Department of Agriculture-Agricultural Research Service, Beltsville, MD, United States.
Xianyong LanCollege of Animal Science and Technology, Northwest A&F University, Yangling, China.
Chuzhao LeiCollege of Animal Science and Technology, Northwest A&F University, Yangling, China.
Yongzhen HuangCollege of Animal Science and Technology, Northwest A&F University, Yangling, China.
Yueyu BaiAnimal Health Supervision in Henan Province, Zhengzhou, China.
Xinglei QiBiyang Bureau of Animal Husbandry of Biyang County, Biyang, China.
Fengpeng LinBiyang Bureau of Animal Husbandry of Biyang County, Biyang, China.
Hong ChenCollege of Animal Science and Technology, Northwest A&F University, Yangling, China.
Northwest A&F University · CNYangzhou University · CNUnited States Department of Agriculture · US

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Adipose tissue plays central role in determining the gustatory quality of beef, but traditional Chinese beef cattle have low levels of fat content. We applied RNA-seq to study the molecular mechanisms underlying adipocyte differentiation in Qinchuan cattle. A total of 18,283 genes were found to be expressed in preadipocytes and mature adipocytes, respectively. 470 of which were significantly differentially expressed genes (DEGs) [false discovery rate (FDR) values < 0.05 and fold change ≥ 2]. In addition, 4534 alternative splicing (AS) events and 5153 AS events were detected in preadipocytes and adipocytes, respectively. We constructed a protein interaction network, which suggested that collagen plays an important role during bovine adipogenic differentiation. We characterized the function of the most down-regulated DEG (

Indexed as

adipocyte differentiationalternative splicingcattledifferentially expressed genestranscriptome analysistransthyretin

Identifiers

PMID30405687
PMCPMC6200853
OpenAlexW2897890047

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.