Evidence map›Paper›PMID 30405243›Full record

ArticleNature2018

Type 9 secretion system structures reveal a new protein transport mechanism.

Frédéric Lauber, Justin C Deme, Susan M Lea, Ben C Berks

Abstract read
In one paragraph

Article in Nature, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 105 papers.

0numbers the graph read from it
0cells of the map it votes in
105citing papers in PubMed
13.2field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

105 citing papers in PubMed, 115 citations in OpenAlex.

  1. Review
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  9. The C-terminal domain of T9SS component protein SprA assistsApplied and environmental microbiology · 2025
    Article
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  14. Review
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45 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors at 1 institution in 1 country.

Frédéric LauberDepartment of Biochemistry, University of Oxford, Oxford, UK.
Justin C DemeSir William Dunn School of Pathology, University of Oxford, Oxford, UK.
Susan M LeaSir William Dunn School of Pathology, University of Oxford, Oxford, UK. susan.lea@path.ox.ac.uk.
Ben C BerksDepartment of Biochemistry, University of Oxford, Oxford, UK. ben.berks@bioch.ox.ac.uk.
University of Oxford · GB

Funding

Wellcome Trust 100298Wellcome Trust 100298/Z/12/ZWellcome Trust 107929Wellcome Trust 107929/Z/15/ZWellcome Trust 201536Wellcome Trust 201536/Z/16/Z
6 · The paper itself

Abstract

The type 9 secretion system (T9SS) is the protein export pathway of bacteria of the Gram-negative Fibrobacteres-Chlorobi-Bacteroidetes superphylum and is an essential determinant of pathogenicity in severe periodontal disease. The central element of the T9SS is a so-far uncharacterized protein-conducting translocon located in the bacterial outer membrane. Here, using cryo-electron microscopy, we provide structural evidence that the translocon is the T9SS protein SprA. SprA forms an extremely large (36-strand) single polypeptide transmembrane β-barrel. The barrel pore is capped on the extracellular end, but has a lateral opening to the external membrane surface. Structures of SprA bound to different components of the T9SS show that partner proteins control access to the lateral opening and to the periplasmic end of the pore. Our results identify a protein transporter with a distinctive architecture that uses an alternating access mechanism in which the two ends of the protein-conducting channel are open at different times.

Indexed as

Cryoelectron MicroscopyFlavobacteriumBacterial Secretion SystemsModels, MolecularMultiprotein ComplexesProtein BindingProtein DomainsProtein Structure, SecondaryProtein TransportBacterial Secretion SystemsMultiprotein Complexes

Identifiers

PMID30405243
PMCPMC6927815
OpenAlexW2899749851

What OpenQuestion holds

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Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.