Evidence map›Paper›PMID 30403545›Full record

ArticleMolecular biology of the cell2019

In vitro reconstitution of DNA replication initiated by genetic recombination: a T4 bacteriophage model for a type of DNA synthesis important for all cells.

Jack Barry, Mei Lie Wong, Bruce Alberts

Abstract read
In one paragraph

Article in Molecular biology of the cell, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 6 papers.

0numbers the graph read from it
0cells of the map it votes in
6citing papers in PubMed
0.4field-weighted citation impact, top 38% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

6 citing papers in PubMed, 10 citations in OpenAlex.

  1. Article
  2. Review
  3. Article
  4. Article
  5. Review
  6. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors at 1 institution in 2 countries.

Jack BarryDepartment of Biochemistry and Biophysics, University of California, San Francisco, San Francisco, CA 94158-2517.
Mei Lie WongDepartment of Biochemistry and Biophysics, University of California, San Francisco, San Francisco, CA 94158-2517.
Bruce AlbertsDepartment of Biochemistry and Biophysics, University of California, San Francisco, San Francisco, CA 94158-2517.
University of California, San Francisco · US

Funding

DNA/PROTEIN INTERACTIONS IN DNA REPLICATION CONTROLR01GM024020 · NIGMS · UNIVERSITY OF CALIFORNIA SAN FRANCISCO · PI JOHNSON, ALEXANDER D · 1985 to 1994
–
DNA-PROTEIN INTERACTIONS IN DNA-REPLICATION CONTROLR37GM024020 · NIGMS · UNIVERSITY OF CALIFORNIA SAN FRANCISCO · PI ALBERTS, BRUCE · 1989 to 1992
–
NIGMS NIH HHS GM24020
6 · The paper itself

Abstract

Using a mixture of 10 purified DNA replication and DNA recombination proteins encoded by the bacteriophage T4 genome, plus two homologous DNA molecules, we have reconstituted the genetic recombination-initiated pathway that initiates DNA replication forks at late times of T4 bacteriophage infection. Inside the cell, this recombination-dependent replication (RDR) is needed to produce the long concatemeric T4 DNA molecules that serve as substrates for packaging the shorter, genome-sized viral DNA into phage heads. The five T4 proteins that catalyze DNA synthesis on the leading strand, plus the proteins required for lagging-strand DNA synthesis, are essential for the reaction, as are a special mediator protein (gp59) and a Rad51/RecA analogue (the T4 UvsX strand-exchange protein). Related forms of RDR are widespread in living organisms-for example, they play critical roles in the homologous recombination events that can restore broken ends of the DNA double helix, restart broken DNA replication forks, and cross over chromatids during meiosis in eukaryotes. Those processes are considerably more complex, and the results presented here should be informative for dissecting their detailed mechanisms.

Indexed as

DNA ReplicationModels, BiologicalRecombination, GeneticBacteriophage T4DNADNA, Single-StrandedDNA, SuperhelicalDNA Topoisomerases, Type IDNA, ViralTemplates, GeneticViral ProteinsDNADNA, Single-StrandedDNA, SuperhelicalDNA Topoisomerases, Type IDNA, ViralOkazaki fragmentsViral Proteins

Identifiers

PMID30403545
PMCPMC6337909
OpenAlexW2990593821

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC-SA
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.