Evidence map›Paper›PMID 30402903›Full record

ArticleJournal of clinical laboratory analysis2019

PTPN22 1858C>T polymorphism is associated with increased CD154 expression and higher CD4+ T cells percentage in rheumatoid arthritis patients.

Yeniley Ruiz-Noa, Jorge Hernández-Bello, Mara A Llamas-Covarrubias, Claudia A Palafox-Sánchez, Edith Oregon-Romero, Pedro Ernesto Sánchez-Hernández, Maria Guadalupe Ramírez-Dueñas, Isela Parra-Rojas, Jose Francisco Muñoz-Valle

Open access · bronzeAbstract read
In one paragraph

Article in Journal of clinical laboratory analysis, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 4 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
4citing papers in PubMed, 1 pooled it
0.5field-weighted citation impact, top 26% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

4 citing papers in PubMed, 1 synthesis or guideline pooled it, 6 citations in OpenAlex.

  1. Pooled it
  2. Trial
  3. Biomolecules · 2025
    Article
  4. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 2 institutions in 1 country.

Yeniley Ruiz-NoaInstituto de Investigación en Ciencias Biomédicas, CUCS, Universidad de Guadalajara, Guadalajara, México.
Jorge Hernández-BelloInstituto de Investigación en Ciencias Biomédicas, CUCS, Universidad de Guadalajara, Guadalajara, México.ORCID https://orcid.org/0000-0001-8004-1811
Mara A Llamas-CovarrubiasInstituto de Investigación en Ciencias Biomédicas, CUCS, Universidad de Guadalajara, Guadalajara, México.ORCID https://orcid.org/0000-0001-6059-673X
Claudia A Palafox-SánchezInstituto de Investigación en Ciencias Biomédicas, CUCS, Universidad de Guadalajara, Guadalajara, México.ORCID https://orcid.org/0000-0003-0836-4186
Edith Oregon-RomeroInstituto de Investigación en Ciencias Biomédicas, CUCS, Universidad de Guadalajara, Guadalajara, México.ORCID http://orcid.org/0000-0001-6010-0837
Pedro Ernesto Sánchez-HernándezDepartamento de Fisiología, Laboratorio de Inmunología, CUCS, Universidad de Guadalajara, México.ORCID https://orcid.org/0000-0001-5047-8115
Maria Guadalupe Ramírez-DueñasDepartamento de Fisiología, Laboratorio de Inmunología, CUCS, Universidad de Guadalajara, México.ORCID https://orcid.org/0000-0001-8066-5966
Isela Parra-RojasFacultad de Ciencias Químico-Biológicas, Universidad Autónoma de Guerrero, Chilpancingo, México.ORCID https://orcid.org/0000-0002-9213-8263
Jose Francisco Muñoz-ValleInstituto de Investigación en Ciencias Biomédicas, CUCS, Universidad de Guadalajara, Guadalajara, México.ORCID https://orcid.org/0000-0002-2272-9260
Universidad de Guadalajara · MXUniversidad Autónoma de Guerrero · MX

Funding

Effect of Breast Density on Screening Recall with Digital Breast TomosynthesisR01CA161749 · NCI · UNIVERSITY OF PENNSYLVANIA · PI KONTOS, DESPINA · 2012 to 2021
$3.6M
Consejo Nacional de Ciencia y Tecnología: SSA-IMSS-ISSSTE-CONACYT registration#161749
6 · The paper itself

Abstract

backgroundCD40 is a costimulatory molecule for B cells, and CD154 is a marker of CD4+ T cells activation. CD40-CD154 interaction promotes pro-inflammatory cytokines secretion and autoantibodies production. PTPN22 gene encodes LYP protein, an inhibitor of T- and B-cell activation. PTPN22 1858C>T polymorphism confers rheumatoid arthritis (RA) susceptibility. Hence, we evaluate the relationship between 1858C>T polymorphism with CD40 and CD154 expression and IFN-γ secretion in RA patients.

methodsPTPN22 1858C>T polymorphism was genotyped in 315 RA patients and 315 control subjects (CS) using PCR-RFLP method. Later, we selected only ten anti-CCP-positive RA patients, naïve to disease-modifying antirheumatic drugs and ten CS, all with known 1858C>T PTPN22 genotype. The CD40 and CD154 membrane expressions were determined by flow cytometry in peripheral B and T cells, correspondingly.

resultsThe B cells percentage and mCD40 expression were similar between RA and CS (P > 0.05) and we did not find an association between these variables and the 1858C>T polymorphism. The CD4+ T cells percentage was higher in RA patients than CS (P = 0.003), and in the RA group, the CD4+ T cells percentage and mCD154 expression were higher in the 1858 T allele carriers (P = 0.008 and P = 0.032, respectively). The IFN-γ levels were lower in RA patients carrying the PTPN22 risk allele (P = 0.032).

conclusionThe PTPN22 1858 T risk allele is associated with increased CD4+ T cells percentage and high mCD154 expression in RA patients, which could favor the pro-inflammatory cytokine release and the establishment of the inflammatory response at the seropositive RA.

Indexed as

AdultAgedArthritis, RheumatoidCD40 LigandCD4-Positive T-LymphocytesCohort StudiesFemaleGenetic Predisposition to DiseaseHumansInterferon-gammaLymphocyte CountMaleMiddle AgedPolymorphism, Single NucleotideProtein Tyrosine Phosphatase, Non-Receptor Type 22CD40 LigandInterferon-gammaProtein Tyrosine Phosphatase, Non-Receptor Type 22PTPN22 protein, humananti-CCP positiveCD154CD40IFN-γPTPN22rheumatoid arthritis

Identifiers

PMID30402903
PMCPMC6818609
OpenAlexW2900067365

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.