Evidence map›Paper›PMID 30401768›Full record

ArticlemBio2018

A Genome-Wide Screen Identifies Genes in Rhizosphere-Associated

Zhexian Liu, Polina Beskrovnaya, Ryan A Melnyk, Sarzana S Hossain, Sophie Khorasani, Lucy R O'Sullivan, Christina L Wiesmann, Jen Bush, Joël D Richard, Cara H Haney

Open access · goldAbstract read
In one paragraph

Article in mBio, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 68 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
68citing papers in PubMed, 1 pooled it
18.6field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

68 citing papers in PubMed, 1 synthesis or guideline pooled it, 130 citations in OpenAlex.

  1. Root colonization by beneficial rhizobacteria.FEMS microbiology reviews · 2024
    Pooled it
  2. Review
  3. Article
  4. TheApplied and environmental microbiology · 2026
    Article
  5. Article
  6. Article
  7. Article
  8. Article
  9. Article
  10. Article
  11. Article
  12. Review
  13. Review
  14. Article
  15. Article
  16. Article
  17. Article
  18. Article
  19. Article
  20. Article

8 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors at 2 institutions in 2 countries.

Zhexian LiuDepartment of Microbiology and Immunology, The University of British Columbia, Vancouver, Canada.
Polina BeskrovnayaDepartment of Microbiology and Immunology, The University of British Columbia, Vancouver, Canada.
Ryan A MelnykDepartment of Microbiology and Immunology, The University of British Columbia, Vancouver, Canada.
Sarzana S HossainDepartment of Microbiology and Immunology, The University of British Columbia, Vancouver, Canada.
Sophie KhorasaniDepartment of Molecular Biology, Massachusetts General Hospital, Boston, Massachusetts, USA.
Lucy R O'SullivanDepartment of Molecular Biology, Massachusetts General Hospital, Boston, Massachusetts, USA.
Christina L WiesmannDepartment of Microbiology and Immunology, The University of British Columbia, Vancouver, Canada.
Jen BushDepartment of Molecular Biology, Massachusetts General Hospital, Boston, Massachusetts, USA.
Joël D RichardDepartment of Microbiology and Immunology, The University of British Columbia, Vancouver, Canada.
Cara H HaneyDepartment of Microbiology and Immunology, The University of British Columbia, Vancouver, Canada cara.haney@msl.ubc.ca.ORCID 0000-0002-6099-6677
University of British Columbia · CAMassachusetts General Hospital · US

Funding

Genetic Analysis of the Plant Defense ResponseR37GM048707 · NIGMS · MASSACHUSETTS GENERAL HOSPITAL · PI AUSUBEL, FREDERICK M · 2005 to 2014
$5.5M
GENETIC ANALYSIS OF THE PLANT DEFENSE RESPONSER01GM048707 · NIGMS · MASSACHUSETTS GENERAL HOSPITAL · PI AUSUBEL, FREDERICK M · 1993 to 2004
$1.9M
NIGMS NIH HHS R01 GM048707NIGMS NIH HHS R37 GM048707
6 · The paper itself

Abstract

PubMed holds no abstract for this paper.

Indexed as

Genome, BacterialRhizosphereArabidopsisBiofilmsGenes, BacterialGenetic FitnessPlant ImmunityPseudomonas fluorescensPutrescinePutrescineArabidopsispattern-triggered immunityphosphodiesterasePseudomonasputrescinerhizosphere

Identifiers

PMID30401768
PMCPMC6222131
OpenAlexW2949943233

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.